Mycolicibacterium aurum: NCTC10437_01001
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Entry
NCTC10437_01001 CDS
T06794
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10437_01001 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mauu03400
]
NCTC10437_01001 (recB)
Enzymes [BR:
mauu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC10437_01001 (recB)
DNA repair and recombination proteins [BR:
mauu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10437_01001 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEG51888
UniProt:
A0A448IHT0
LinkDB
All DBs
Position
1:complement(1028550..1031873)
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AA seq
1107 aa
AA seq
DB search
MEPFDLLGPLPAPRTTTVLEASAGTGKTFALAGLVTRYVAEGVATLDQMLLITFGRAASQ
ELRERVRSQIVDAVRAFDAPETVTGNEIITHLLTGSDTQLAERKRRLRDALAGFDAATIA
TTHQFCQLVLRSLGVAGDTDSGVELVESLDQLVSEIVDDLYLAHFGQEREEPLLSYDAAL
TLAREVVGTAHTELRPVDPAPGFDPAVRVQFAKAVCAELETRKRKLGILHYDDLLSRLAD
ALQPADSPARARMQQRWSIVMVDEFQDTDPVQWQVIDCAFSGHSTLILIGDPKQAIYAFR
GGDIVTYLHAASTAGQQKTLGTNYRSDGPLVDSLQAVMRDAQLGDRRIVVRKVEADHAEH
RLAGAPHNAPFRLRVVTRDQLGTRPDRVIPIDRLRRHIPKDMAADIAALLGSGATFDGKP
LQAGGIAVIVESHRDGHACFDALAAAGIPAVYTGDSDVFSSPAADDWLCLLEAFDQPHRA
GLVRAAATTMFFGRTAEDLAAHGDVLTDEIAETVRQWADFARDRGVAAVFEAAQLSGMGT
RVLTWVDGERHMTDLAHLTQALHDTAHREHYSVPALRDWLRSQRQERGMRSGAVERNRRL
DSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRNIQTRDVVMFHESSPAGDVRCLHVGGELS
PDFSAAQQQGRREAAADDVRLTYVAMTRAQSQVVAWWAPSNDEPNGGLSRLLRGRSPGDP
VVPDRCDPPRIDDPDAMALLRAWSDAGGPVLEESIIAPLVEVELPSPPDDLDVRHFTRRI
DASWRRTSYSGLIRSAEAEQSPGVSSEPEVVELDDEAGEVPGSEPADPQAPSVPSPMADL
PMGAKFGTIVHAVLETADPFAPDLAAELEAKVREHSLWWPVDVPPAELAAALVPMHDTPL
GPLAPGVTLRRIGMRDRLREMDFEFPLAGGDRRVDPPALSLSDVGRLLAEHLPQGDPLAP
YAERLTDSMLAAQSLKGYLTGSLDAVLRIDGRYLVVDYKTNWLGDPARPLTSADYQPARL
TEAMLHSDYPLQALLYCVVLHRFLRWRVTGYSAQRHIGGVLYLFVRGMCGADTPVVDGHP
AGVFSWQPPAALIEALSDLLDAGAVPA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggagcccttcgacctgctcggcccgctgcccgcgccgcgcaccacgacggtgctggag
gccagcgcaggcaccggtaagacgttcgcgctggccggtctcgtcacgcgttacgtcgcc
gagggcgtggcgacgctggaccagatgctgctgatcacgttcggccgcgcggccagccag
gaactgcgcgagcgggtgcgttcccagatcgtggacgcggtgcgggcgttcgacgccccc
gagaccgtcaccggcaacgagatcatcacccatctgctgacgggctcggatacccaactg
gcggaacgaaagcggcggttgcgcgatgcgctggccggtttcgacgccgcgacgatcgcc
accacgcatcagttctgtcagctggtgctgcggtcgctcggcgtggccggcgacaccgat
tccggtgtcgagctcgtcgagagcctggatcagctggtgtccgagatcgtcgacgacctc
tacctcgcacacttcggccaggagcgcgaggaaccgctgctgtcctacgacgccgccttg
acgctggcgcgcgaggtggtcggcaccgcgcacaccgagttgcggccggtcgatccggcg
cccggcttcgaccccgcggtgcgggtgcagttcgcgaaagcggtgtgcgcggagctggag
acacgcaagcgcaagcttgggatcctgcactacgacgacctgctgtcgcggctggccgac
gcgctgcaaccggccgattcgccggcgcgggcgcgcatgcaacagcggtggtcgatcgtg
atggtcgacgagttccaggacaccgacccggtgcagtggcaggtgatcgactgcgccttc
agcgggcactccacgctgatcctgatcggcgatcccaagcaggccatctatgcgttccgc
ggcggcgacatcgtgacgtacctgcacgcggcctcgaccgcgggccagcagaagaccctg
ggcaccaactaccgcagcgacggccccctggtcgacagcctgcaggcggtcatgcgcgac
gcccagctgggcgaccggcggatcgtggtgcgcaaggtcgaggccgaccacgccgagcac
cggctcgcgggcgccccgcacaacgcgccgtttcggctgcgggtggtgacccgcgaccag
ctcggcacccggcccgaccgtgtcatccccatcgaccggctgcgccggcacattccgaag
gacatggccgccgacatcgccgccctcctcggcagcggggcgacgttcgacggtaaaccg
ttgcaggcgggtggcatcgcggtgatcgtcgagagccatcgcgacgggcacgcctgcttc
gacgcgctggccgcggcgggcatccccgctgtctacaccggcgactcggatgtgttcagc
tcccccgccgccgacgattggctgtgcctactggaggccttcgatcagccgcaccgggca
ggactggtccgcgccgcggccaccaccatgttcttcggccggaccgccgaggacctcgcc
gcccacggcgatgtgctgaccgacgagatcgccgaaacagtgcggcagtgggccgacttc
gcccgggatcgcggtgtggccgcggtgttcgaggcggcccagctgtccggtatggggacg
cgcgtgctgacgtgggtggacggcgagcggcacatgaccgatctcgcgcatctgacccag
gccctgcatgacaccgcccaccgcgagcactacagcgtgcccgctctgcgcgactggctg
cgctctcagcgtcaggagcgcgggatgcgcagtggcgcagtcgaacgcaaccgtcggctg
gacagcgacgccgccgcggtacagatcatgacggtgtgggtcagcaagggtctgcagttc
cccgtcgtgtacctgccgttcgcgttcaaccgcaatatccagacccgggacgtggtgatg
ttccacgagtcctccccggccggcgacgtccgctgcctgcacgtcggcggcgagctgagc
cccgacttctcggcggcacagcagcagggccggcgggaggcggccgccgacgacgtccgg
ctcacctacgtcgcgatgacccgcgcgcagtcgcaggtcgtcgcgtggtgggcgccgtcg
aacgacgagcccaacggcgggctgtcccggctgttgcggggcaggtcgccgggcgatccg
gtggtgcccgaccggtgcgacccgccccggatcgacgatcccgatgcgatggcgctgctg
cgcgcgtggtccgacgccggtggcccggtcctcgaggagtcgatcatcgcgccgctggtc
gaggtcgaattgcccagcccacccgatgatctcgacgtgaggcacttcacccggcgtatc
gacgcgtcgtggcggcgcacctcgtactccggtctcatccggtccgccgaggccgaacag
tcgcccggggtgagcagcgagcccgaggtggtggagctcgacgacgaggcgggcgaggta
cccggatccgagcccgccgatccgcaggccccgtcggtcccgtctccgatggcggacctg
ccgatgggggcgaagttcggcacaatcgtgcacgcggtgctggagaccgcggacccgttc
gcaccggacctggcggccgagctggaggccaaggtccgcgagcactcgctgtggtggccg
gtggacgtaccccctgccgagctggcggccgcgttggtgccgatgcacgacactccgctg
gggccgctggcgccgggtgtgacgctgcgccgtatcggtatgcgagaccggttgcgggag
atggatttcgagtttccgctcgccggcggcgatcgtcgggtggacccgccggcgctctcg
ctgagcgatgtcggcaggctgcttgccgagcacctgccgcagggcgacccgctggcgccg
tacgccgagcggctgaccgacagcatgctggcagcgcagtctttgaagggatatctgacc
gggtcgctcgacgccgtgctgcgcatcgacggccggtatctcgtcgtggactacaagacg
aactggctgggcgatccggcgcgtccactgacctctgcggactatcagccggcgcggttg
accgaggcgatgctgcactcggactatccgttgcaggccctgctgtattgcgttgtactg
caccggtttctgcgctggcgggtaacggggtactcggcgcagcgccacatcggcggagtg
ctgtacctcttcgtgcgcggcatgtgcggcgccgacaccccggtggtcgacggacacccg
gcgggggtcttcagctggcagccgccggcagcgctgatcgaggccctgtcggacctgctg
gacgccggggcggtgccggcatga
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integrated database retrieval system
