Mycolicibacterium aurum: NCTC10437_01040
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Entry
NCTC10437_01040 CDS
T06794
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10437_01040 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mauu03021
]
NCTC10437_01040 (rpoB)
03400 DNA repair and recombination proteins [BR:
mauu03400
]
NCTC10437_01040 (rpoB)
Enzymes [BR:
mauu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10437_01040 (rpoB)
Transcription machinery [BR:
mauu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10437_01040 (rpoB)
DNA repair and recombination proteins [BR:
mauu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10437_01040 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
VEG51924
UniProt:
A0A448IHY5
LinkDB
All DBs
Position
1:1069774..1073274
Genome browser
AA seq
1166 aa
AA seq
DB search
MLEGCILAGSRQIESTTNNSVPGAPNRISFAKLREPLEVPGLLDVQTESFEWLIGAEDWF
QRAVDRGDVDPRGGLQEVLEELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTYAA
PLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDENI
DKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIVER
FGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARV
GRYKVNKKLGLNVGQPITSSTLTEEDVVATIEYLVRLHQGDQTMTAPGGSEVPVEVDDID
HFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFF
GTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEG
PNIGLIGSLSVYARVNPFGFIETPYRKVIDGQVTDEINYLTADEEDRHVVAQANSPIDAD
NRFTESKILVRRKGGEVEFVTGTEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANM
QRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKAGVIEEVSADYITVMADDGTRHTYR
MRKFARSNHGTCANQRPIVDAGQRVESGQVLADGPCTENGEMALGKNLLVAIMPWEGHNY
EDAIILSSRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIIR
IGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIR
VFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPIEDMPFMPDGT
PVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIDVASTPEWAANLPEDMLSAPADSIV
ATPVFDGAREGELEGLLGSTLPNRDGDVMVNAEGKSQLFDGRSGEPFPYPVTVGYMYILK
LHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIK
SDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDD
EDLERAAANLGINLSRNESASVEDLA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggatgcatcttggcagggtcccgccagatcgagtcaaccactaacaactcc
gttcccggagcaccaaatcgaatttctttcgccaaactccgcgagccgcttgaggttccg
gggctacttgacgttcagacagagtctttcgagtggttgatcggcgcagaagattggttc
cagcgggctgtcgatcgcggtgacgtcgacccccggggcggtttgcaggaagtcctcgaa
gagctctcgcccatcgaggacttctccggctcgatgtcgctgtcgttctccgatccgcgc
ttcgacgaggtgaaagcccccgtcgacgagtgcaaagacaaggacatgacgtacgcggct
ccgctgttcgtcacggccgagttcatcaacaacaacaccggcgagatcaagagccagacg
gtcttcatgggtgacttcccgatgatgaccgagaagggcaccttcatcatcaacggcacc
gagcgtgtcgtggtgagccagctcgtccgttcgcccggtgtgtacttcgacgagaacatc
gacaagtccaccgagaagacgctgcacagcgtcaaggtgatcccgggccgcggcgcctgg
ctcgagttcgacgtcgacaagcgcgacaccgtcggtgtgcgtatcgaccgcaagcgtcgt
cagcccgtcacggtgctgctcaaggcgctcggctggaccaacgagcagatcgtggagcgc
ttcggcttctccgagatcatgatgagcacgctggagaaggacaacaccgcaggcaccgac
gaggcgctgctggacatctaccggaagctgcgaccgggcgagccccccaccaaggagtcc
gcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgacctggcccgcgtc
ggccgctacaaggtcaacaagaagctgggcctcaacgtcggccagccgatcaccagttcg
acgctgaccgaagaggacgtcgtcgcgaccatcgagtacctggtccgcctgcatcagggc
gaccagacgatgaccgcgcccggtggctccgaggtgcccgtcgaggtcgacgacatcgac
cacttcggcaaccgtcgtctgcgtaccgtcggcgagctgatccagaaccagatccgcgtc
ggcctctcgcgtatggagcgtgtcgtgcgtgagcgcatgaccacccaggacgtcgaggcg
atcacgccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttc
ggcacgtcgcagctgtcgcagttcatggaccagaacaacccgctgtcgggtctgacccac
aagcgccgcctgtcggcgctgggcccgggtggtctgtcccgtgagcgcgccggcctcgag
gtccgcgacgtgcactccagccactacggccggatgtgccccatcgagacgccggaaggc
ccgaacatcggcctgatcggttcactgtcggtgtacgcgcgggtcaacccgttcggcttc
atcgagacgccgtaccgcaaggtcatcgacggtcaggtcaccgacgagatcaactacctg
accgccgacgaggaggaccgccacgtcgtggcgcaggccaactcgccgatcgatgccgac
aaccggttcaccgagtcgaagatcctggtccgccgtaagggcggcgaggtcgagttcgtc
acgggcaccgaggtcgactacatggatgtctcgccgcgccagatggtgtcggtcgcgacg
gccatgatcccgttcctcgagcacgacgacgccaaccgcgccctgatgggtgccaacatg
cagcgccaggcggttccgctggtgcgtagcgaggcaccgctggtcggtaccggcatggag
ctccgtgccgccatcgacgccggtgacgtggttgtcgccgacaaggccggcgtgatcgaa
gaggtctccgccgactacatcaccgtgatggccgacgacggcacccggcacacctaccgg
atgcgcaagttcgcccgctccaaccacggcacctgcgccaaccagcgtccgatcgtggac
gccgggcagcgtgtcgagtcgggtcaggtgctcgccgacggtccgtgcaccgagaacggt
gagatggctctgggcaagaacctgctcgtggcgatcatgccgtgggagggccacaactac
gaagacgcgatcatcctctccagccgtctggtcgaagaggacgtgctcacctcgattcac
atcgaggagcacgagatcgacgcccgcgacaccaagctgggcgccgaggagatcacccgg
gacatcccgaacgtctccgatgaggtgctggccgatctcgacgagcgcggcatcatccgc
atcggcgccgaggttcgcgacggcgacatcctggtcggcaaggtcacgcccaagggcgag
acggagctgaccccggaagagcgtctgctgcgtgccatcttcggcgagaaggcccgcgag
gtccgcgacacctcactgaaggtgccgcacggcgagtccggcaaggtcatcggcatccgc
gtgttctcgcgcgaggacgacgacgagctgccggccggcgtcaacgagctggtccgcgtc
tacgtggcccagaagcgcaagatctccgacggtgacaagctcgccggacgccacggcaac
aagggcgtcatcggcaagatcctgccgatcgaggacatgccgttcatgccggacggcacc
ccggtggacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggccagatc
ctggaaacccacctcgggtgggtcgccaaggccggctggaacatcgacgtcgcaagcacc
ccggagtgggcggcgaacctgcccgaggacatgctgtcggccccggcggacagcatcgtg
gccaccccggtgttcgacggtgcccgcgagggtgagctggagggtctgctgggctcgacg
ctgccgaaccgcgacggagacgtcatggtcaacgccgagggcaagtcgcagttgttcgat
ggccgtagtggcgagccgttcccgtacccggtgacggtgggctacatgtacatcctgaag
ctgcaccaccttgtggacgacaagatccacgcccgctcgaccggtccgtactcgatgatc
acgcagcagccgctgggtggtaaggcgcagttcggtggtcagcggttcggcgagatggag
tgctgggccatgcaggcctacggcgccgcctacacgctgcaggagctgctcaccatcaag
tccgacgacacggtgggtcgcgtcaaggtgtacgaagccatcgtcaagggcgagaacatc
cccgaacccggtatcccggagtcgttcaaggtgcttctcaaggagctgcagtcgctctgc
ctgaacgtcgaggtgctgtcttcggacggcgcggcgatcgaaatgcgtgacggcgacgac
gaggacctggagcgcgctgctgccaacctcggcatcaacctgtcccgcaacgaatccgca
tctgtcgaagacctggcctga
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