Mycolicibacterium aurum: NCTC10437_01041
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Entry
NCTC10437_01041 CDS
T06794
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10437_01041 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mauu03021
]
NCTC10437_01041 (rpoC)
03400 DNA repair and recombination proteins [BR:
mauu03400
]
NCTC10437_01041 (rpoC)
Enzymes [BR:
mauu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10437_01041 (rpoC)
Transcription machinery [BR:
mauu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10437_01041 (rpoC)
DNA repair and recombination proteins [BR:
mauu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10437_01041 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VEG51925
UniProt:
A0A3S4RYF9
LinkDB
All DBs
Position
1:1073315..1077268
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDTEMRHNELSTLEAEMAVERKAIEDQRDADLEARAQKLEAD
MKELEEEGAKSDVRRKVRDGGEREMRQLRDRTQRELDRLEEIWTTFTKLAPKQLIVDELL
YRELQDRYGEYFEGAMGAESIKKLIETFDIDAEAESLRDTIKNGKGQKKLRALKRLKVVA
AFQTNRNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFFLTTEIDGDTGEGA
AAAKDQAETGVYSSPAEAQMAVDRGALSVRAKIKIRLTSQRPPAEVEAEQFPDGWKMGDA
WLAETTLGRVLFNELLPRGYPFVNKQMHKKVQASIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTIAMSDVLVPPQKQEILERYEAEADGIEKQYQRGKLNRDERNEALVKIWQDA
TEEVGQALKSHYPKDNPIITIVESGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCETERGINVTL
AELQADGPLLRDQHIETSAYARTLATDAVDANGTVIVERGHDLGDPAIDALLAAGITEVK
VRSVLTCATGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVT
GGADIVGGLPRVQELFEARIPRNRAPIADVSGRIRLEESEKFYKITIVPDDGGEEVVYDK
LSRRQRLKVFKHDDGSERLLTDGDHVEVGQQLLEGSADPHEVLRVQGPREVQIHLVKEVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFETENRRVVAEGAE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIP
AGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGPAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggtctcgcgaccgcggacgacatc
cgcaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccagagaaggacggcctgttctgcgagaagatcttcggacctactcgcgactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgcaccc
gtcacgcacatctggtacttcaagggcgtgccctcacgtctgggctacctgctggacctg
gctccgaaggatctcgagaagatcatctacttcgcggcctacgtgatcaccgcggtcgac
accgagatgcgtcacaacgagctgtccacgcttgaggccgagatggccgtcgagcgcaag
gcgatcgaggatcagcgcgacgccgacctggaggcccgggcccagaagctcgaagccgac
atgaaggagctcgaggaagagggcgcgaagtccgatgtgcgccgcaaggtgcgcgacggt
ggcgagcgcgagatgcgccagctgcgcgaccggacccagcgtgagctggaccggctcgag
gagatctggacgacgttcaccaagctggctcccaagcagctgatcgtcgacgagctgctc
taccgcgagctgcaggaccgctacggcgagtacttcgagggcgccatgggcgccgagtcg
atcaagaagctcatcgagaccttcgacatcgacgccgaggccgagagcctgcgcgacacc
atcaagaacggcaagggccagaagaagctgcgcgcgctcaagcgactcaaggtcgtcgcg
gcgttccagaccaaccggaactcgccgatgggcatggtcctcgacgccgtcccggtgatc
ccgccggaactgcgcccgatggtccagctcgacggtggccgcttcgcgacctcggatctc
aacgatctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagaggctgatcgatctc
ggtgcccctgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggtcgtcgcggccgtccggtcaccggaccgggcaaccgtccgctcaag
tcgctgtcggatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgtgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcactcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatctccgagcacccggtgctgctgaaccgc
gcaccaacgctgcaccgcctcggtatccaggccttcgagccgcagctggtggagggcaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgccgacttcgacggcgaccag
atggccgtgcaccttccgctgtcggcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggccgcccgctggccatgccgcgtctggac
atggtgaccggtctgttcttcctgaccaccgagatcgacggtgacacgggtgagggcgcc
gcggcagccaaggatcaggcggagaccggcgtgtacagctcgccggccgaggcccagatg
gcggtggaccgtggcgcgctcagcgtgcgggccaagatcaagatccggctgacgtcacag
cgtccgccggccgaggtcgaggccgagcagttcccggacggctggaagatgggcgacgcc
tggttggccgagaccaccctgggccgtgtcctgttcaacgagctgctgccgcggggctac
ccgttcgtcaacaagcagatgcacaagaaggtccaggcgtcgatcatcaacgatctcgcc
gagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggccacccgttcgggtgtcaccatcgccatgtccgacgtgctggtgccgccgcag
aagcaggagatcctcgagcgctacgaggcggaagccgacggcatcgagaagcagtaccag
cgcggcaagctcaaccgtgacgagcgcaacgaagcactggtcaagatctggcaggacgcg
accgaagaggtcggtcaggcgctgaagtcgcactacccgaaggacaacccgatcatcacg
atcgtggagtcgggtgccacgggtaacttcacccagacgcggacgctggccggcatgaag
ggtctggtgacaaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgacggtgctggagtacttcatcaacacccacggcgcccgtaagggtctggcg
gatacggcgcttcgtaccgcggactcgggttacctgacccgtcgtctggtcgacgtgtcg
caggacgtcatcgtgcgcgagaccgactgtgagaccgagcgtggcatcaacgtcaccttg
gccgagcttcaggccgacggaccgctgctgcgtgatcagcacatcgagacgtccgcctac
gcgcggacgctggccaccgacgcggtcgatgccaacggcaccgtgatcgtcgagcgtgga
cacgatctcggtgatccggcgatcgacgctctgctggccgcaggcatcaccgaggtgaag
gtccgctccgtgctgacctgcgccacgggcaccggcgtgtgcgccatgtgctacggccgt
tcgatggcgaccggcaagctggtcgacatcggcgaggcggtcggcatcgtggccgcgcag
tccatcggcgagcccggcacgcagctgaccatgcgtaccttccaccagggtggtgtcacc
ggtggcgccgacatcgtcggtggtctgccccgtgtgcaggaactgttcgaggcccgtatc
ccacggaaccgtgccccgatcgccgacgtctcagggcgtattcgcctcgaggagagcgag
aagttctacaagatcaccatcgttcccgatgacgggggcgaagaggtcgtgtacgacaag
ctctcgcgtcgtcagcggctgaaggtgttcaagcacgacgacggctccgagcgtctgctg
accgacggcgaccacgtcgaggtcgggcagcagctgctggaaggctccgccgacccgcac
gaggtgctccgcgtccagggcccccgcgaggtgcagatccacctcgtcaaggaggtccag
gaggtgtaccgcgcgcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtccgg
cagatgctgcgtcgcgtcacgatcatcgattcgggtgcgacggagttcctgcccggctcg
ctgaccgagcgcggcgagttcgagaccgagaaccgtcgggtggtcgccgagggcgccgag
cccgcggcgggtcgcccggtgctgatgggtatcacgaaggcatcgctggccacggactcg
tggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatcaac
tgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatcccg
gccggtaccggcatcaaccggtaccgcaacatccaggtgcagccgaccgaagaggcccgt
gctgcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccag
gcgaccggccccgcggtgccgctggacgattacggttacagcgactaccggtag
DBGET
integrated database retrieval system
