Mycolicibacterium aurum: NCTC10437_01508
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Entry
NCTC10437_01508 CDS
T06794
Symbol
pcrA_1
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03420
Nucleotide excision repair
mauu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10437_01508 (pcrA_1)
03430 Mismatch repair
NCTC10437_01508 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mauu03400
]
NCTC10437_01508 (pcrA_1)
Enzymes [BR:
mauu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10437_01508 (pcrA_1)
DNA repair and recombination proteins [BR:
mauu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10437_01508 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC10437_01508 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VEG52544
UniProt:
A0A3S4VJ43
LinkDB
All DBs
Position
1:1549050..1552319
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AA seq
1089 aa
AA seq
DB search
MTTPRFSPAELSRALGLFEPTDEQAAVISAPPGPLVVIAGAGAGKTETMAARVVWLVANG
YARPGEVLGLTFTRKAAGQLLRRVRARLARLAGAGLMITSAGADFVDDPVTIGTYHAFAG
NLLREFGLLLPIEPDTRLLSETELWQLAFRVVCEHPEALDTDKSPATITDMVLRLAGQLS
EHLVDTAQLRDTHVELDRLVHALPAGRYQRDRGPSQWLLRMLATQTERTTLVPLIDAVHR
RMREERVMDFGMQMASAARLASQFPQVGEQLRQRYRVVLLDEYQDTGHAQRVALSSLFGA
GADDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLADGTPAPTLELRTSWRNPPEVL
HLANEVSVDARRRSVAVRALQPRPGAEPGNVVCALMSDVEAEREWVADHVARRWHGGLAE
TGAAPTAAVLVRRNADAAPMAAALNRRGVAVEVVGLAGLLAVPEVADVVAMLRLSADPTA
GAAAVRVLTGPRWRLGARDVAALWRRAVDLVKAVPSAEATSATAEIIAQLGPDADAACLA
DAICDPGSAAAYSEPGYARIVALGRELTSLRGHLSSPLPDLVAEVRRILGVDAEVRAAQP
VSAGWSGTEHLDAFGDVVADFATRGQSTVSALLAYLDIAEQVENGLAPAEVNVSADRVQI
LTVHAAKGLEWQIVAVPHLSGRVFPSTASPRTWLTDAADLPPLLRGDCATVSEHGVPVLD
CSDVSDRKGLSDKISDHKRSLDQRRTDEERRLLYVAITRAEHTLLVSGHHWGATESKPRG
PSAFLCELKAVIDASVDAGAPCGVVDAWAEAPADGEPNPLRDRVIEATWPVDPIAARRAP
TDHGAQLVATAMTSEIEEGRPDPFGWTTDVDALLAERELAARRPVPPLPPQLSVSSLVEL
GRDPEAVAQRLQRRLPRRPDAQALLGTAFHEWVQRYFQAEKLFDLDDLPGAVDADRQDRG
ELEELETAFALSPWAARTPIDVEVPFDMMIAGHVVRGRIDAIFADDDGGVTVVDWKTGEP
PSTQEDLQRNAIQLAVYRLAWARLHGRPVSSVRAVFHYVRSGRTVVPDVLPDEDALTALL
AEQVGEDAA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccccccggttcagccccgccgaactgtccagggcgttgggccttttcgaaccc
accgacgagcaggccgcggtcatctccgcgccgccgggcccgctggtggtcatcgccggt
gccggtgcgggcaagaccgagaccatggcggcgcgggtggtgtggctggtggccaacggt
tatgcccgtcccggggaggtgctcgggctgaccttcacccgcaaggccgcgggccagctg
ctgcgccgggtgcgggcccgcctggcgcggctggccggggcggggttgatgatcacctct
gccggtgcggatttcgtcgacgatccggtcacgatcggcacctaccacgccttcgcgggc
aacctgctccgcgagttcggtctgctgctgcccatcgagccggacacccggctcctcagt
gagaccgagctgtggcagctggcgtttcgcgtggtgtgcgagcatcccgaggcgttggac
accgacaagtcaccggcaaccatcaccgacatggtgctgcggctggccggtcaactctcc
gaacatctcgtcgacaccgcgcaactgcgcgatacccatgtcgagctcgaccggcttgtc
cacgcgctgcccgcaggcaggtaccagcgtgaccgcgggcccagccagtggctgctgcgc
atgctggccacgcagaccgagcgcaccacgctggtgccgctgatcgatgcggtgcaccgt
cggatgcgtgaggaacgcgtcatggatttcggcatgcagatggcctcggctgcgcggctg
gcatcccagttcccgcaggtcggggagcagctgcggcagcgctaccgggtggtcctcctc
gacgagtaccaggacaccgggcacgctcagcgggtggcgctgtcgtcgctgttcggtgcg
ggtgccgacgacgggctggcgctcaccgccgtcggagatccgatccagtcgatctacggc
tggcgcggtgcatcggccaccaatctgccgcggttcaccaccgacttcccgctggccgac
ggaacgccggcccccaccctggaactgcgcaccagttggcgtaatccgcccgaggtgctg
cacctggccaacgaggtgtctgtcgacgcccggcgccggtcggtggccgtccgtgcgctg
cagccccggcccggcgccgaaccgggcaacgtggtgtgcgcgttgatgtccgacgtcgag
gccgaacgcgagtgggtcgccgatcatgtcgcacggcggtggcacggcggtctcgccgag
accggcgccgccccgaccgccgcggttctggtgcgccgcaacgccgacgcggcgccgatg
gcagcggcactgaatcggcgcggcgtggcggtggaagtagtcggtctggccggcctgctg
gccgtccctgaggtggccgacgtcgtcgcgatgctgaggttgtccgccgacccgacggca
ggggcagctgcggtgcgggtgctgacgggtccgcggtggcggctcggcgcccgggatgtc
gcagcgctgtggcggcgggcggtggacctcgtcaaagccgtcccgtccgcggaggccacc
tcggcgacggccgagatcatcgcgcagctcggccccgacgcggatgcggcttgcctggct
gacgcgatttgcgatccgggatccgcggcggcgtactccgaaccgggctacgcgcggatc
gtcgcactggggcgggagctgacgtcgctgcgtggccacctttccagcccgctgccggac
cttgtcgccgaggtgcgccgcatcctcggggtcgacgcggaagtccgcgcggcccagcct
gtctcggcgggatggtcgggcacggagcacctcgatgcgttcggtgatgtggtggcggac
ttcgcgacacgggggcagtcgacggtgtcggcccttctggcgtacctggacatcgccgag
caggtcgagaacggtctcgcgcccgcggaggtgaacgtgtccgccgaccgggtgcagatc
ctgacggtgcatgcggcgaaaggcctggagtggcagatcgtcgccgtgccgcatctgtcg
gggcgggtgtttccgtccaccgcgtcccctcgtacgtggctcaccgatgctgccgacctc
ccgccgctgctgcgcggggactgcgcgacggtgtccgagcacggggtgccggtattggac
tgctcggatgtcagcgatcgaaaagggctgtcggacaagatctcggatcacaagcggagt
ctggatcaacggcgcaccgacgaggaacgccgactgctgtacgtcgcgatcacccgtgcg
gagcacaccctgctggtgtccggacatcactggggggccaccgaatccaagccgcgcggc
ccgtcggcgttcctgtgcgaacttaaggccgtcatcgacgcatcggtcgacgccggcgcg
ccgtgcggagtcgtcgacgcatgggccgaagcccccgccgacggtgagcccaacccgctg
cgcgatcgggtcatcgaggcgacatggccggtcgatccgatcgcggcgcgccgcgcaccc
accgaccacggcgcgcaactggtggccaccgcgatgacatcggagatcgaggagggccga
cccgacccgtttggctggaccaccgacgtcgatgccctgctggccgagcgtgaactggcc
gcccggcggcctgtacccccgctgccgcctcagctgtcggtgagctcgctggtggaactc
ggacgcgatcctgaggcggtcgcgcaacggctgcagaggcggttgccgcgccgtcccgac
gcgcaggcgttgctgggcaccgcgtttcacgaatgggtgcagcggtacttccaggcggag
aagctcttcgacctcgacgacctgcccggtgccgttgacgcggaccgccaggatcggggt
gagctcgaggaactcgagacggccttcgcgctgtcgccgtgggcggcgcgcacaccgatc
gacgtggaagtgccgttcgacatgatgatcgccggtcatgtcgtacgcggtcggatcgat
gcgatcttcgccgacgacgacggcggtgtcaccgtcgtggactggaagaccggtgaaccg
ccatcaacccaggaggacttgcagcgcaatgcaatccagctcgccgtctatcgacttgcc
tgggcgcgactgcacggccgcccggtgtcgtcggtgcgggcggtgtttcactacgtccgg
tccggacgcaccgtcgtcccggacgtgttgcccgacgaggacgcgctgaccgcgctgctg
gccgagcaggtgggagaggacgccgcgtga
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