Mycolicibacterium aurum: NCTC10437_02227
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Entry
NCTC10437_02227 CDS
T06794
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10437_02227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mauu03019
]
NCTC10437_02227
Messenger RNA biogenesis [BR:
mauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10437_02227
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
VEG53970
UniProt:
A0A448INH7
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All DBs
Position
1:2323267..2324943
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AA seq
558 aa
AA seq
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MDLALTPPAPLAPGGLRVTALGGINEIGRNMTVFEHLGRLLIVDCGVLFPTHDEPGVDLI
LPDLRHLQDRLDDVEALVVTHGHEDHIGAIPFLLKQRADIPVVGSKFTLALIAEKCREHR
IKPVFVEVAEGGSSRHGVFECEYFAVNHSIPGCLAIGIHTGAGTVLHTGDIKLDQLPPDG
RPTDLPGMSRLGDSGVDLFLCDSTNSEIPGVSPSESEVGPALHRLMRGAEGRVIVACFAS
NVDRVQSIIDAAVALGRRVSFVGRSMVRNMGIARDLGYLKVADEDVLDIAAAEMMPADRV
VLITTGTQGEPMAALSRMSRGEHRSITLTNGDLIILSSSLIPGNEEAVFGVMDSLAKIGA
RVVTNQHARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAALAASAGIPEDNI
VIAENGVSVDLVAGRVSVAGAVPVGKMFVDGLITGDVGDATLGERLILSSGFIAITVIVR
RGTGKPVAPAHLHSRGFSEDPKALEAAAQKVDAELDHLASQNVTDPTRIAQGVRRAVGKW
VGETYRRQPMIVPTVIEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggacctagcattgactccaccggccccgctcgcgccgggcggcctccgggtgaccgcg
ctgggcggcatcaacgaaatcggccgcaacatgaccgttttcgagcatctcgggcgcctg
ctcatcgtcgactgcggcgtgctcttccccacccacgacgagccgggcgtcgatctgatc
ctcccggacctgcgtcatctgcaggaccgcctcgatgacgtcgaagccctggtggtgacc
cacggacatgaggaccacatcggcgcgatcccgttcctgctcaagcagcgcgcggacatc
ccggtcgtcggttcgaagttcacgctcgcgctgatcgcggagaaatgccgcgagcaccgg
atcaagccggtgttcgtcgaggtcgccgagggaggcagttcacgccacggcgtattcgag
tgcgagtacttcgcggtcaaccactccatccccgggtgcttggccatcggtatccacacc
ggggcgggcacggtgctgcacaccggcgacatcaagctcgaccagttgccacctgacggc
agacccaccgacctgccggggatgtcacgactgggcgactccggtgtcgatctgttcctc
tgcgactcgacgaactccgagataccgggcgtcagcccatcggaaagcgaggtcggcccc
gccctgcaccgtctgatgcggggcgccgagggcagggtcattgtcgcgtgcttcgcctcg
aacgtcgaccgtgtgcagtcgatcatcgatgccgcggtggccctgggcaggcgggtctcg
ttcgtcggcaggtcgatggtccgcaacatgggcatcgcacgtgacctcggctatctcaag
gtggccgacgaggatgtcctcgacatcgccgccgccgagatgatgcccgccgaccgggtg
gtgctcatcaccaccggtacacagggcgagccgatggccgcgttgtcccggatgtcgcgt
ggcgagcaccgcagcatcacgttgaccaatggcgatctcatcatcctgtcctcgtcgctg
atccccggcaacgaagaagcggtgttcggcgtgatggattcactcgccaagatcggcgcc
cgcgtggtcaccaatcagcatgcgcgagtgcatgtctcgggtcacgcctacgccggcgag
ctgttgttcctctacaacggggtgcgcccgcgcaacgtcatgccggtgcacggaacatgg
cgcatgttgcgcgccaacgccgcgctcgccgccagcgcagggattcccgaggacaacatc
gtcatcgccgagaacggcgtcagcgtcgacctggttgccggccgagtgagcgtcgcaggc
gcggtaccggtcggaaagatgttcgtcgacggcctcatcaccggcgacgtgggtgacgcc
acgctgggtgagcgtctgatcctatcctcgggtttcatcgcgatcaccgtcatcgtgcgg
cgcggcaccggcaagccggtcgccccggcccatctgcactcgcggggattctccgaagac
cccaaggcgctcgaggcggctgcccagaaggtcgatgccgagctggatcatctcgcctcg
cagaatgtcaccgatccgacgcgcatcgctcagggggtacgtcgcgcggtcggcaagtgg
gtcggggagacctatcggcgacagccgatgatcgttcccacggtcatcgagatctga
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