Mycolicibacterium aurum: NCTC10437_02284
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Entry
NCTC10437_02284 CDS
T06794
Symbol
hrdB_2
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC10437_02284 (hrdB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mauu03021
]
NCTC10437_02284 (hrdB_2)
Transcription machinery [BR:
mauu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10437_02284 (hrdB_2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
VEG54079
UniProt:
A0A3S4RW94
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Position
1:complement(2378736..2380232)
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AA seq
498 aa
AA seq
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MAPACAPKSRTTERVYVAAIKASPATDEPVKRTAAKTPAKKAPAKKAAKSAPAKATKPRA
AKAADAPATRGRAKKGPEAEAVDGVVVADDTDLDGEPGDDLVEVDDTEIELDDIEVEDEA
AADPADDDSDDESGEADGAAAPKAAGKTAKDAAGDDDALPEPSEKDKASGDFVWDEEESE
ALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYCTQLMAEIAEKG
EKLTTAQRRDYMWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIR
AVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDL
GREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDA
VSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKT
MSKLRHPSRSQVLRDYLD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcccgcgtgcgccccgaagagccgcacgaccgaaagggtgtacgtggcagcgatc
aaggcaagcccggcgaccgacgagccggtgaagcgcaccgccgcaaagaccccggccaag
aaggcgcctgcgaagaaggccgccaagagcgctcccgcgaaggcgaccaaaccgcgcgcc
gccaaggctgccgatgcgcccgccacccgcggccgcgccaagaagggccccgaggccgag
gcggtcgacggcgtggtcgtggccgacgacaccgacctcgacggcgagcccggcgacgac
ctcgtcgaggtcgacgacaccgagatcgaactcgacgacatcgaggtcgaggacgaagcc
gctgccgacccggccgacgacgactccgacgacgagtcgggcgaggctgacggcgcggcc
gcacccaaggccgcaggcaagaccgccaaggacgccgcgggcgatgacgacgcactcccc
gagccctccgagaaggacaaggcttccggcgatttcgtctgggacgaggaggaatccgag
gcgctgcggcaggcccgcaaagacgccgagctgaccgcttccgcggactcggtgcgcgcc
tacctcaagcagatcggcaaggtcgcgctgctcaacgccgaagaagaggtggagctcgcc
aagcgcatcgaagcaggcctgtactgcacccagttgatggcggagatcgccgaaaagggc
gagaagctgaccaccgcgcagcgccgcgactacatgtggatctgccgcgacggagaccgc
gcgaagaaccatctgctggaggcgaacctccgcctggtcgtgtcgctggccaagcgctac
accggccgcggcatggccttcctggacctgatccaggagggcaacctcggtctgatccgc
gcggtggagaagttcgactacaccaagggttataagttctccacgtacgcgacgtggtgg
atccgtcaggccatcacccgggccatggccgaccaggcccgcaccatccgcatcccggtg
cacatggtcgaggtcatcaacaagctcggccgcatccagcgcgagctgctccaggatctg
ggccgcgagcccacgcctgaagagctggccaaggagatggacatcacgccggagaaggtg
ctggagatccagcagtacgcgcgcgagcccatctcgctggatcagacgatcggcgacgaa
ggcgacagccagctcggcgacttcatcgaggactccgaagccgtggtggccgtcgacgcg
gtctcgttcacgctgctccaggaccagctgcagtccgtccttgagacgctgtcggagcgg
gaagccggtgtggttcggctgcggttcggcttgaccgacggtcagccccgcaccctcgac
gagatcggccaggtgtacggcgtgacgcgtgagcgcatccgtcagatcgagagcaagacg
atgtcgaagctccgtcaccccagccgatctcaggtgctgcgcgactatctggactag
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