Mycolicibacterium aurum: NCTC10437_04085
Help
Entry
NCTC10437_04085 CDS
T06794
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10437_04085 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mauu03021
]
NCTC10437_04085 (rho)
03019 Messenger RNA biogenesis [BR:
mauu03019
]
NCTC10437_04085 (rho)
Transcription machinery [BR:
mauu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NCTC10437_04085 (rho)
Messenger RNA biogenesis [BR:
mauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC10437_04085 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Fungal_virus_P2_C
AAA_22
VWA_2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
VEG57079
UniProt:
A0A3S4S0P4
LinkDB
All DBs
Position
1:complement(4347727..4349841)
Genome browser
AA seq
704 aa
AA seq
DB search
MTDTDLITADGSNESSELPKSVTNVSTSAEAGAPVSAPAADDAPAAAAPARRGALTGMVL
PELRALAKEIGVEGASGLRKGELIAAIRERRGESNGTSAPKAASPAPAEAPAESTDTSDK
GAAGGDATAQTADAQPPQRRRERRGASREQGGPTNEPAKSEDNADATQADAGEAADRDKK
SQQDPEAGGRDTRQNRDNQRNQDTRNQDNRNQDNRNQDNKADSEQDNRSDGGGQNRGGRG
GDNSARDRGDNNARDRGGDNNRDRGGDNNRDRGGDNNLDDDGDGRQGRRGRRFRDRKRRD
RGEGGGNAGGGQDRDTELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVR
KNGLRRGDAVTGAVRVPKDGGDNTNQRQKFNPLVRLDSVNGKPVEEAKKRPEFQKLTPLY
PNQRLRLETTPDKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECH
LMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVL
LDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVET
GSTGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLSADEFAVVHKL
RRVLSGLDPHQAIDLLMSQLRKSKNNYEFLVQVSKNTPGGNDHD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctgatggcagcaacgaaagcagtgagctgccgaag
tccgtgacaaacgtctccacctccgcggaagcaggtgcgcccgtctcggcgcccgccgcg
gatgatgccccggcagcggccgcccccgctcgtcgtggtgctctgaccggcatggtcctg
ccggagctgcgcgctctggccaaggagatcggtgtcgaaggcgcttccggcctgcgcaag
ggcgaactgatcgcggccatccgggaacgtcgcggcgaatccaacggcacgtccgcgccc
aaggccgcttcgcctgcccccgcagaggcccctgccgagtccacggacacgagcgacaag
ggtgcggccggcggcgacgcaaccgcccagaccgcggatgcgcagcctcctcagcgtcgc
cgtgagcgccggggcgcctcgcgtgagcagggcggcccgacgaacgagcccgccaagagc
gaggacaacgccgacgccacgcaagccgacgccggtgaggccgcggaccgtgacaagaag
tcgcagcaggatccggaggctggtggccgcgacacccggcagaaccgggacaatcagcgc
aaccaggacacccggaaccaggacaaccgcaaccaggacaaccgcaaccaggacaacaag
gccgactccgagcaggacaaccggtccgacggcggcggccagaaccgtggcggtcgcggc
ggcgacaacagtgcgcgcgaccggggcgacaacaacgcccgcgaccggggcggcgacaac
aaccgtgaccggggcggcgacaacaaccgcgaccgcggcggcgacaacaacctcgacgac
gacggcgatggccggcaaggtcgtcggggccgccggttccgcgaccgcaagcgccgcgac
cgcggtgagggcggcggcaacgcaggcgggggtcaggaccgcgacaccgagctgcgcgag
gacgatgtcgtgcagcccgtggccggcatcctcgacgtactcgacaactacgcgttcgtg
cgcacgtcgggttacctcgccggtccgaacgacgtgtacgtctcgatgaacatggtccgc
aagaacggtttgcggcgcggcgacgcggtcaccggcgcggtgcgcgtccccaaggatggc
ggcgacaacaccaaccagcggcagaagttcaacccgctcgtccggctggacagcgtgaac
ggcaagccggtcgaggaagccaagaagcggcccgagttccagaaactcacaccgctctac
ccgaaccagcggctgcgtctggagacgactccggacaagctgacgacgcgcgtcatcgac
ctgatcatgccgatcggcaaggggcagcgcgccctgatcgtgtctccgcccaaggccggt
aagaccacgatcatgcaggacatcgccaacgcgatcacccgcaacaatccggaatgccac
ctgatggtggtgctcgtcgacgagcggccggaagaggtcaccgacatgcagcgctcggtc
aagggtgaggtcatcgcctccaccttcgaccggccgccgtccgaccacacccaggccgcc
gagctcgccatcgagcgggccaagcgcctggtcgagcagggcaaggacgttgtcgtgctg
ctggactcgatcacccggctgggccgcgcctacaacaacgcctcgcccgcctcgggccgg
atcctgtccggtggtgtcgattccaccgctctgtatccgccgaagcgcttcctcggcgcc
gcgcgcaacatcgaagaaggcgggtcgctgacgatcatcgccaccgcgatggtcgagacc
ggctccaccggtgacacggtgatcttcgaggagttcaagggcaccggtaacgccgagctc
aagctcgaccgcaagatctccgagcggcgcgtcttccccgcggtcgacgtcaacccgtcg
ggcacccgtaaggacgagctgctgctgtccgccgacgagttcgcggtggtgcacaagctg
cgccgggtgctctcgggtctggacccgcatcaggcgatcgacctgttgatgagccagctg
cgcaagtccaagaacaactacgagttcctggtccaggtgtcgaagaacacccccggcggc
aacgaccacgactga
DBGET
integrated database retrieval system
