Mycolicibacterium aurum: NCTC10437_04198
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Entry
NCTC10437_04198 CDS
T06794
Symbol
deaD
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10437_04198 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mauu03019
]
NCTC10437_04198 (deaD)
03009 Ribosome biogenesis [BR:
mauu03009
]
NCTC10437_04198 (deaD)
Enzymes [BR:
mauu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10437_04198 (deaD)
Messenger RNA biogenesis [BR:
mauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10437_04198 (deaD)
Ribosome biogenesis [BR:
mauu03009
]
Prokaryotic type
rRNA helicases
NCTC10437_04198 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
VEG57191
UniProt:
A0A3S4VWP5
LinkDB
All DBs
Position
1:complement(4461453..4463144)
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AA seq
563 aa
AA seq
DB search
MTSSNAEPDPADLSFADLQIHPEVLRAVADVGYETPSPIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTTSRITQALVLAPTRELALQVAEAFSRYGAHLAVNVLPIYGGSP
YGPQMAGLRRGAQIVVGTPGRVIDHLDKGSLDLSHLDYLVLDEADEMLQMGFAEDVERIL
EGTPEYKQVALFSATMPPAIRKITSKYLHDPVQVKVESKTATADNIMQRYIQVSGNRKMD
ALTRLLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQAVRERTISSLKDG
KLDILVATDVAARGLDVDRISHVLNYDIPHDPESYVHRIGRTGRAGRSGTALLFVSPRER
HLLNSIERVTRQKLVERHLPTVDDVNAQRVEKFRDSITEALASPGIEMFRKLIEAYERDH
DVPMADIAAALALQSRDGSEFLMTEPPPEKRRERPDRPGRDDAGPRKRREVRSDLATYRI
AVGKRHKVMPGAIVGAIANEGGLNRSDFGHISIKVDHSFVELPANLSKQTLKALENTRIQ
GQLIQLQPDSGPKPPHRGKPKSK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcaaacgcggagccagaccccgccgacctgagctttgctgacctgcagatt
caccccgaggtgctgcgggccgtcgccgacgtcggctacgagacgccctcgccgatccag
gccgcgaccattccggcgatgctcgccggatccgacgtcgtcggactggcccagaccgga
accggcaagacggcggcgttcgccatcccgatcctgtcgaagatcgacaccaccagccgc
atcacccaggcgctggtcctcgcgccaacccgcgagctcgcgctgcaggtcgcggaggct
ttcagccgctacggcgcgcacctggcggtcaacgtgctcccgatctacggtggctccccg
tacggtccgcagatggccggcctacggcgcggcgcccagatcgtcgtcgggaccccgggc
cgggtcatcgaccatctggacaagggcagcctcgacctttcgcacctggactacctggtg
ctcgacgaggccgacgagatgctgcagatgggtttcgccgaggacgtggaacgcatcctc
gaaggcactcccgagtacaagcaggtcgcgttgttctcggccaccatgccgccggcgatc
cgcaagatcacgtcgaagtacctgcacgacccggtgcaggtgaaggtcgagtcgaagacc
gcgaccgccgacaacatcatgcagcgctacatccaggtgtcgggaaaccgcaagatggat
gcgctgacccggctgctcgaggtcgagccgttcgaggccatgatcgtgttcgtccgcacc
aagcaggccaccgaggaggtcgccgagaagctgcgcgcccgcggattctccgcagcggcc
atcaacggagacatcgcccaggcggtgcgcgagcgcaccatctcctcgctcaaggacggc
aagctcgacatcctcgtcgcgaccgacgtggccgcgcgcggactcgacgtcgaccgcatc
tcgcatgtgctgaactacgacatcccgcacgaccccgagtcctatgtgcaccggatcggg
cgcaccggccgggccggccgctcgggcacggcgctgctgttcgtctcgccgcgcgagcgc
catctgctcaactcgatcgagcgggtcacccggcagaagctggtcgagcggcacctgccc
accgtcgacgacgtgaacgcccagcgcgtggagaagttccgcgactcgatcaccgaggcg
ctggcctcgccgggcatcgagatgttccgcaagctgatcgaggcctacgagcgcgaccac
gatgtgccgatggccgacatcgccgccgcgctggcactgcagagccgcgacggcagcgag
ttcctgatgacggagccgccgccggagaagcgcagggagaggccggaccgtccgggccgc
gacgatgcggggccgcgcaagcgccgcgaggtccgcagcgacctcgccacctaccgcatc
gcggtgggtaagcggcacaaggtcatgccgggcgcgatcgtcggggccatcgccaacgag
ggcgggctcaaccgcagcgacttcggtcacatctcgatcaaggtcgaccactcgttcgtc
gagttgcccgcgaatctgtccaagcagactctgaaggcattggagaacaccaggattcag
gggcagttgatccagctccaacccgacagcgggcccaagccgccgcatcggggcaagccc
aagtccaagtga
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