Mycobacterium avium 104: MAV_1066
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Entry
MAV_1066 CDS
T00433
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MAV_1066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_1066
Enzymes [BR:
mav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MAV_1066
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MAV_1066
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MAV_1066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
ABK66368
UniProt:
A0A0H2ZV44
LinkDB
All DBs
Position
1004792..1005655
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AA seq
287 aa
AA seq
DB search
MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPPISALHGQTVVGAERWGKYLG
LRTEGLFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGSPGAAPGFDLTEAGTQK
RLAVWLVDDPARVPGIAALGPDALDLDVDALADLLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSDKQLATLHDAMVTVLTDAVSRSVGQGAAMLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKILADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgagatcgaagcgctggccgaccacctgcggcgccatgccgtcggg
ctgccgatcggccgggtcgacgtcgccgccctgtccgtgctcaagacgttcgacccgccg
atcagcgcgctgcacgggcagaccgtggtgggcgccgagcgctggggcaaatatctgggc
ctgcggaccgagggccttttcctgatcgcccatctgtcccgggcggggtggttgcgctgg
tcggaccggctgaccgcggcgccgctgcggcccggcaagggcccgatcgcactgcgggtg
catctgggctcacccggcgcggcccccggcttcgacctgaccgaggccggcacccagaag
cggctggcggtgtggctcgtcgacgacccggcgcgggtgcctgggatcgccgccctgggc
ccggacgccctggacctggacgtcgacgcgctggccgacctgctggccggcaacaccggc
cggatcaagacggtgatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gacgagatcctgcacgtcgcgaagatctccccgttcgccacggccggcaagttgtctgac
aaacagctggccaccctgcatgacgccatggtcacggtgctcaccgacgcggtgagccgg
tccgtcggccagggggcggccatgctcaagggcgagaagcgttccggattgcgggtgcat
gcccggaccgggttgccgtgcccggtgtgtggcgacaccgtgcgcgaagtgtcgttcgcg
gacaagtcttttcagtattgcccgacgtgccagaccggcggcaagatcctggccgaccgg
cggatgtcgcgtttgctgaagtag
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integrated database retrieval system
