Mycobacterium avium 104: MAV_1071
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Entry
MAV_1071 CDS
T00433
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03420
Nucleotide excision repair
mav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAV_1071 (pcrA)
03430 Mismatch repair
MAV_1071 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_1071 (pcrA)
Enzymes [BR:
mav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAV_1071 (pcrA)
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAV_1071 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MAV_1071 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
OstA_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABK68232
UniProt:
A0A0H2ZZL2
LinkDB
All DBs
Position
1008924..1011248
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AA seq
774 aa
AA seq
DB search
MSVHVTDAKPVSEAEQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRVAYLIAA
RGVGVGQVLAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIEGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPAAAVANLTDDSD
ELSRTVASVYGEYQRRLRAANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLVDEYQD
TNHAQYVLVRELVGTDTEDGVPPGELCVVGDADQSIYAFRGATIRNIEDFERDYPDATTI
LLEQNYRSTQNILSAANSVIARNSGRRDKRLWTDAGAGELIVGYVADNEHDEARFVAEEI
DALAQKGEITYNDVAVFYRTNNSSRSFEEVFIRAGIPYKVVGGVRFYERKEIRDIIAYLR
VLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAAEGKVPMLNSRA
EKAIAGFVELLDDLRGRLDDDLGDLVESVLERTGYRRELESSTDPQELARLDNLNELVSV
AHEFSTDRANAAALDESLDAADDEDVPDTGVLAEFLERVSLVSDSDEIPEDGAGMVTLMT
LHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPVELSEERRLAYVGITRARQRLYLSRAIVR
SSWGQPMLNPESRFLREIPQELIEWRRTAPAPSFSAPVSGAGRFGTPRAAPTRAAMSKRP
LLVLAPGDRVTHDKYGLGRVEEVSGAGESAMSLIDFGSSGRVKLMHNHAPISKL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgtaacagatgccaagccggtctccgaagccgagcaattgctcgagggg
ctcaatccgcaacagcgccaggccgtggtgcacgagggttcgccgctgctgatcgtcgcc
ggggcgggttcggggaagacggcggtgctgacccgccgcgtcgcctacctgatcgcggcc
cggggggtcggggtgggccaggtgctggccatcaccttcaccaacaaggccgccgcggag
atgcgggaacgggtggtgcggctggtgggcaaccgggcccgcgccatgtgggtgtccacc
tttcattcgacctgcgtgcgcatcctgcgcaaccaggcgtcgctgatcgagggcctcaat
tccaacttctcgatctacgacgccgacgactcgcggcggctgctgcagatgatcggccgc
gacatgggcctggacatcaagcgctactcgccgcggctgttggccaacgcgatctccaac
ctgaagaacgagctgatcgaccccgccgcggcggtcgccaacctcaccgacgactccgac
gagttgtcccgcaccgtggcaagcgtctacggcgaataccagcgccggctgcgggcggcc
aacgcgctggacttcgacgacctgatcggcgagacggtggcggtgctgcgcgccttcccg
cagatcgcccagcactaccggcggcggttccggcacgtgctcgtcgacgagtaccaggac
accaaccacgcgcagtacgtgctggtgcgcgaattggtgggcaccgacaccgaggacggc
gttccccccggcgagctgtgcgtggtcggcgacgccgaccagtcgatttatgccttccgc
ggcgccaccatccgcaacatcgaggacttcgaacgcgactacccggacgcgacaaccatt
ctgctggaacagaattaccgctcgacacagaacatcctgtcggcggccaactcggtgatc
gcgcgtaactccggtcgccgcgacaagcggctgtggaccgacgccggcgccggcgagctg
atcgtcggctacgtcgccgacaacgagcacgacgaggcccgcttcgtcgccgaggagatc
gacgcgctcgcgcagaagggcgagatcacctacaacgacgtcgccgtcttctaccgcacc
aacaactcgtcgcggtccttcgaggaggtgttcatccgcgccgggatcccctacaaagtc
gttgggggggtgcgcttttacgagcgcaaggagatccgcgacatcattgcctacctgcgg
gtgctggacaaccccggcgacgcggtgagcatgcggcgcatcctcaacaccccgcgccgg
gggatcggtgatcgggccgaggcctgcgtggcggtgtacgccgagaacaccggtgccagt
ttcgccgacgcgctggtggccgcggccgaaggcaaagtgccgatgctgaattcgcgcgcg
gagaaggcgatcgcgggtttcgtcgagttgctggacgacctgcgcggccggctggacgac
gatctcggcgacctggtcgagtcggtgctcgaacgcaccggctaccgccgggagctggaa
tcgtccaccgatccccaagagctggcgcgtctggacaacctcaacgaactcgtcagcgtc
gcacacgaattcagcaccgaccgggcgaacgccgccgcgctggacgagtcgctggacgcc
gcggacgacgaagacgtgcccgacaccggtgtgctggccgagttcttggaacgggtctcg
ctggtctccgacagcgacgagatccccgaggacggcgccgggatggtcacgctgatgacc
ctgcacaccgcgaagggcctggagttcccggtggtgttcgtcaccggttgggaggacggg
atgttcccgcacatgcggtcgctggacgatccggtcgaactctccgaggagcggcggctg
gcctacgtgggcatcacccgggcccggcagcggctctacctgagccgggccatcgtccgc
tcgtcgtggggccagcccatgctcaacccggaatctcgcttcctgcgggagattccgcag
gaactgatcgagtggcggcgcaccgcgccggcgccgtcgttcagcgcaccggtcagcggc
gccggccggttcggcaccccgcgggcggccccgacccgcgccgcaatgagcaaacggccg
ctgctggtgctggcgccgggcgaccgggtgacgcacgacaagtacgggctgggccgagtc
gaggaggtgtccggcgccggcgagtcggcgatgtcactgatcgacttcggcagctccggg
cgggtgaagctgatgcacaaccacgccccgatcagcaagctctaa
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integrated database retrieval system
