Mycobacterium avium 104: MAV_1227
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Entry
MAV_1227 CDS
T00433
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MAV_1227 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_1227 (xseB)
Enzymes [BR:
mav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MAV_1227 (xseB)
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MAV_1227 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ABK67247
UniProt:
A0QC35
LinkDB
All DBs
Position
complement(1175176..1175424)
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AA seq
82 aa
AA seq
DB search
MANNKKDEQAAAATPISRLGYEACRDELIEVVRQLEQGGLDLDASLNLWERGEQLAKRCE
EHLAGARKRIEDALAAGEADDD
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacaagaaggacgagcaggccgccgcggctacacctattagtcgactgggc
tatgaggcgtgccgggacgaactgatcgaggtcgtgcggcaactggaacagggcggcctg
gacctggacgcgtcgctgaacttgtgggaaagaggcgaacagctggctaaacgctgtgaa
gagcacttagctggagcgcgcaagagaatcgaagacgccctcgccgcgggcgaggctgac
gacgactga
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