Mycobacterium avium 104: MAV_1401
Help
Entry
MAV_1401 CDS
T00433
Name
(GenBank) ATP-dependent rna helicase, dead/deah box family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAV_1401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mav03019
]
MAV_1401
03009 Ribosome biogenesis [BR:
mav03009
]
MAV_1401
Enzymes [BR:
mav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAV_1401
Messenger RNA biogenesis [BR:
mav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAV_1401
Ribosome biogenesis [BR:
mav03009
]
Prokaryotic type
rRNA helicases
MAV_1401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ABK64441
UniProt:
A0A0H2ZS46
LinkDB
All DBs
Position
1365258..1366958
Genome browser
AA seq
566 aa
AA seq
DB search
MTLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSKIDVASTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGS
SYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRI
LSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKD
GGIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITAALGAPGIDLFRKLVQDYERE
HDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVG
KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPDFSLVELPAKLPKSTLKRLEQTRISGVL
INLQPDRAAAKARGRDGGKPRRKYGG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcccggacagctcgactgaggctgcctccccgacatttgccgacctgcagatc
catccctcggttttgcgggcgatcgccgacgtcggctacgagacgcccaccggcatccag
gccgcgaccatcccggcgttgatggccggttccgacgtcgtcgggctggcccagaccggc
accggcaagacggccgcgttcgcgatcccgatcctgtccaagatcgacgtcgccagcacc
gccacccaggcgctggtgctggcgcccacccgggagctggcgttgcaggtggccgaggcg
ttcagccgctacggcgcgcatctgccgaagatcaacgtgctgccgatctacggcggctcc
tcctacgccgtgcagctggccggattgaaacgcggcgcccacgtggtggtcggcacgccg
ggccgggtgatcgaccacctcgagcgcggcacgctggacctgtcgcacgtcgactacctg
gtgctcgacgaggccgacgagatgctcaccatggggtttgccgaagaggtcgaccgcatc
ctgtccgagaccccggaatacaagcaggtcgcgctgttctcggcgaccatgccgcccgcg
atccgcaagctcaccgccaagtatctgcacgatcccctcgaggtcagcaccaaagcgaaa
accacgaccgccgagaacatttcgcagcgctacatccaggtcgccggcccgcgcaaaatg
gacgcgctgacccgggtgctggaggtcgagccgttcgaggcgatgatcgtgttcgtccgg
accaaacaggccaccgaggaggtcgccgaaaggctcagggcgcgcggcttctcggcggcc
gcgatcaacggggacatcccgcagggccagcgtgagcggaccgtcgccgccctcaaggac
ggcggcatcgacatcctggtcgccaccgacgtggccgcccgcggcctggacgtcgaacgg
atctcacacgtgctcaactacgacatcccgcacgacaccgagtcctacgtgcaccggatc
gggcgcaccggccgggcgggacgctcgggaaccgcgctgctgttcgtctccccgcgagaa
cgccacctgctcaaggccattgagaaggcgacccgccagccgctcaccgaagccgagctg
cccaccgtcgaggacgtcaacgcccagcgggtggccaagttcgccgactccatcaccgcc
gcgctcggcgctcccggcatcgatctgttccgcaagttggttcaggactacgaacgcgag
cacgacgtcccgatggccgacatcgccgccgcgctggccgtgcagtcacgcgacggcgag
gagttcctgatggcgcccgaaccgccgcgggagcgacgcgaacggcacaccgaacggcgc
gagcgcaccgagaaacccaggagcacaaggccgttggccacctaccgcatcgcggtgggc
aaacggcacaagatcggtccgggcgcgatcgtgggcgccatcgccaacgagggcgggctg
catcgcagcgatttcggccacatcgccatcggacccgacttctcgctggtggagttgccg
gccaagctgcccaagtcgacgctgaaaaggcttgagcagacccgaatctccggagtgctg
atcaacctccagccggaccgggcggcggccaaggcgcgcggtcgggacggcgggaaacca
cgcaggaaatacggcggatga
DBGET
integrated database retrieval system
