Mycobacterium avium 104: MAV_2300
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Entry
MAV_2300 CDS
T00433
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03030
DNA replication
mav03430
Mismatch repair
mav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAV_2300
03430 Mismatch repair
MAV_2300
03440 Homologous recombination
MAV_2300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mav03032
]
MAV_2300
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_2300
Enzymes [BR:
mav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAV_2300
DNA replication proteins [BR:
mav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAV_2300
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAV_2300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ABK68706
UniProt:
A0A0H3A2C3
LinkDB
All DBs
Position
complement(2304280..2306211)
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AA seq
643 aa
AA seq
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MSVVLPTVTTVASDGATQLSFADVGPAFGPEEVALRDTTFVVVDLETTGGRSTSTGETAP
DAITEIGAVKVRDGVVLGEFATLVDPQRSIPPQIMRLTGITTAMVSDAPAIDAVLPMFLE
FAGLDRGAVLVAHNAGFDVGFLRAAAQQCDIAWPRPRVLCTVRLARRVLSREEAPSVRLA
SLARLFAVTTQPTHRALDDARATVDVLHALIERVGNQGVHTYADLRGYLPDVTPAQRRKR
VLAEGLPRRPGVYLFRGPSGEVLYIGTAVDLRRRVAQYFTGADPRGRMKEMVALAGAVDH
VECAHALEAGVRELRLLAAHAPPYNRRSRFPQRWWWVALTDEAFPRLAVVRAPRHDRAVG
PFRARADAADTAELLARFAGLRTCTNRLGRAALHGPLCPEAEVAPCPAARGVTATQYAAA
VARVAALIDGADNSALAAAVDQVAALAERRHFESAARLRDRTATAVEVLWRGQRLRVLAS
LPELVAAAPDGQGGYQLAVVRYGRLAAAGNARRGVPPMPVVDAITAAAQAIWPEPGPLGG
ALVEETALIARWLEAPGVRIVRVEGTQDAAGWASPLRSAGAWAAWAAAARSARLASEQAL
RASELLTEPHPTREQLFGRAGVDGGTGAGQPVLPGRQPFGAAG
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtcgtgctgcctaccgtcaccaccgtggcctccgacggtgcgactcagctgagc
ttcgccgacgtgggaccggcgttcggccccgaggaggtcgcgctgcgcgacaccaccttc
gtggtggtcgacctggaaaccaccggcggacgcagcaccagcaccggggaaaccgcgccc
gacgccatcaccgagatcggggcggtcaaggtgcgcgacggcgtggtgctcggcgagttc
gccaccctggtcgacccgcagcgcagcatcccgccccagatcatgcgactgaccggcatc
accacggcgatggtgtcggacgcgccggccatcgacgcggtgctgccgatgttcctcgag
ttcgccggcttggaccgcggggcggtgctggtcgcccacaacgccggtttcgatgtcggg
ttcctgcgcgccgccgcgcagcagtgcgacatcgcctggccgcgaccgcgggtgctgtgc
acggtccggttggcccgccgggtgctcagccgcgaggaggcccccagcgtgcggctggcc
tcgctggcccggctgttcgccgtgaccacccaacccacccaccgcgccctcgacgacgcc
cgggccaccgtcgacgtgctgcacgccctcatcgagcgggtcggcaaccagggcgtgcac
acctacgccgacctgcgcggctacctgcccgacgtgacgcccgcccagcgccgcaaacgg
gtgctggccgaggggttgccgcgccggccgggggtgtacctgttccgcgggccgtcgggc
gaggtgctctacatcggcaccgccgtcgacctgcggcgccgggtcgcccagtacttcacc
ggcgccgatccgcgcggccggatgaaggagatggtcgcgctggccggcgccgtcgaccac
gtcgagtgcgcgcacgcgctcgaggccggcgtgcgcgagctgcggctgctggccgcccac
gccccgccctacaaccggcggtcccgcttcccccagcggtggtggtgggtggcgctcacc
gacgaggcgttcccccggctcgcggtggtccgggcgccgcggcacgaccgggccgtcggg
ccgttccgggcccgcgccgacgccgccgacaccgccgagctgctggcccggttcgccggg
ctgcgcacctgcaccaaccggctgggccgggcggcgttgcacgggccgctgtgcccggag
gcggaggtggcgccgtgcccggccgcccgcggcgtcacggccacccaatacgcggccgcg
gtggcgcgggtcgcggcgttgatcgacggcgccgacaacagcgcgctggccgccgcggtg
gaccaggtcgctgcgctggccgagcggcgtcacttcgaaagcgccgcccggctgcgcgac
cgcaccgccaccgcggtcgaggtgctgtggcgcggccagcggctgcgggtcctggcctcg
ttgccggagctggttgccgccgcgcccgacgggcagggcggctatcagctggccgtcgtc
cgctacggccggctcgccgcggcgggcaacgcccggcgcggggtgccgccgatgccggtg
gttgacgcgatcaccgctgcggcgcaagcgatttggcccgagccggggccgctgggcggc
gcgctggtcgaggagacggcgctgatcgcgcgctggctggaggccccgggggtgcgcatc
gtccgggtggagggcacccaggacgcggcgggctgggcctccccgctgcgctcggccggg
gcctgggcggcgtgggcggcggcggcgcgctcggcccggctggcaagcgagcaggccctg
cgggcgtcagagctgctgaccgaaccgcacccaacgcgcgagcagctgttcggccgcgcc
ggagtcgatggcggcactggcgcgggccagcccgtcctcccaggccggcaaccattcggc
gcggctggataa
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