Mycobacterium avium 104: MAV_4398
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Entry
MAV_4398 CDS
T00433
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MAV_4398 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mav03021
]
MAV_4398 (rpoA)
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_4398 (rpoA)
Enzymes [BR:
mav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MAV_4398 (rpoA)
Transcription machinery [BR:
mav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MAV_4398 (rpoA)
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MAV_4398 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ABK65760
UniProt:
A0QKU5
LinkDB
All DBs
Position
complement(4536760..4537803)
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVLTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTAIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PELHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPPSFDPSQVAGYDVATGTWSTEAAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgacccaccctgtcggaggaagtcctcaccgacaaccgctcccag
ttcgtcatcgagccgctggagccgggattcggctacaccctgggcaattcgttgcgccgc
acgctgctgtcctcgatcccgggggcggccgtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccaccgtgcccggcgtcaaggaagacgtcaccgcgatcatcctgaacctc
aagagcctggtggtgtcctcggaggaggacgagccggtcaccatgtatctgcgcaagcag
ggtcccggcgaggtcaccgcgggtgacatcgtgccgcccgccggcgtcaccgtgcacaac
cccgagctgcacatcgccacgctgaacgacaagggcaagctcgaggtggagctggtcgtc
gagcgcggccgcggctacgtgccggccgtgcagaaccgcgcctcgggcgccgaaatcggc
cgtatcccagtcgattccatctactcgccggtgctcaaggtcacctacaaggtggacgcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctggacgtggagaccaagagc
tcgatcacgccgcgcgacgcgctggcgtcggcgggtaagaccctggtcgaattgttcggc
ctggcacgcgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gccgaccacatcgcgtcgttcgcgctgccgatcgacgacctggacctgacggtgcggtcc
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggtcagccgcaccgag
tccgacctgctcgacatccgcaacttcggccagaagtccatcgacgaggtgaaggtcaag
ctgcaccagctgggcctgtcgctcaaggacagcccgccgagcttcgacccgtcgcaggtc
gcgggttacgacgtcgccaccggcacctggtccaccgaggccgcctacgacgaccaggac
tacgcggaaaccgaacagctgtaa
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