Mycobacterium avium 104: MAV_4543
Help
Entry
MAV_4543 CDS
T00433
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAV_4543 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_4543 (recB)
Enzymes [BR:
mav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MAV_4543 (recB)
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAV_4543 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
PDDEXK_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABK67894
UniProt:
A0A0H2ZZY1
LinkDB
All DBs
Position
4671084..4674386
Genome browser
AA seq
1100 aa
AA seq
DB search
MERFDLLGALPAARSTTVLEASAGTGKTFALAGLVTRYLADGAATLDQMLLITFGRAASQ
ELRERVRCQIVDAVAAFADPSRAGDNELVAYLLDGTEDRLAARRQRLRDGLAGFDAATIA
TTHQFCQLVLRSLGVAGDTAAGVTLLDSLDELVAEIVDDLYLAHFGQDHDDPVLHYREAL
RLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELDTRKRRLGVLGYDDLLTRLAD
ALATEHSPARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLILIGDPKQAIYAFR
GGDIVTYLRAAETAGQKKTLDTNWRSDSALLQRLQVVLRGAQLGDPAIVVNDVAAHHRGH
RLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDELRQHIGADLAADIRALLAAGATFDGKP
VRAGDIAVIVERHRDAQACFTALCDAGVPAVYTGNSDVFTSQAAEDWLCLLEAFDQPHRP
GVVRAAAATMFFGETAETLAAGGDALTDRIAQTLREWAGHARERGVAAIFEAAQLLGMGN
RVLGWQGGARHMTDLAHLTQLLGEVAHCEHHNLPALRDWLRRQRDERSGAPERNRRLDSD
AAAVQIMTVFVSKGLQYPIVYLPFAFHRNTTDSDVVLFHDEDGTRCLHVGGKDSPDFKTV
ERLGRKEDASDDSRLTYVALTRAQAQVVAWWSPAYHEPNGGLSRLLRGRRPGEPVVPDRC
EPAKISDEDALARLREWEAAGGPVIEEAVPAPAPPLPGVPVPARLENRHFHRGIDTGWRR
TSYSGLIRQAQPSGVGSEPEAAGLDDEVGDILLAPATSVGDVASPMADLPAGATFGTLVH
AVLQTADPFAPDLAAELTARIREHSVWWPVAATPEDMAAAMVPMHDTPLGPLAGGLTLRR
IGLSDRLCELDFELPLAGGDRRSAPPEVRLADLAPLLRAHLPADDVLACYADRLTDRSLG
AESLRGYLTGSIDAVLRIPDGAGHRYLVVDYKTNRLGDAQHPLTAADYDRPRMVEAMLHS
DYPLQALLYSAVLHRFLRWRLAGYDPDRHLGGILYLFVRGMCGPDTPVRDGHPSGVFDWR
PPSSLIAALSDLLDAQGVAV
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcttcgacctgttgggcgcattgccggccgcgcgctccaccacggtgctcgag
gccagcgcgggcaccggaaagacgttcgcgttggccgggctggtgacccgctatctcgcc
gacggcgccgcgaccctggaccagatgttgctgatcaccttcggccgggccgccagccag
gagctgcgggaacgggtgcgctgtcaaatcgtcgacgcggtagccgctttcgccgacccg
tcgcgggcgggcgacaacgagctggtggcctacctgttggacggcaccgaggaccggctc
gccgcgcggcggcaacgcctgcgcgacgggctggccggcttcgacgcggcgacgatcgcc
accacgcatcagttctgccagctggtgttgcgctcgctcggggtggccggcgacaccgcc
gccggggtgaccttgctggacagcctcgacgagctggtggccgagatcgtcgatgacctg
tatctggcgcatttcgggcaggaccacgacgacccggtgctgcactatcgggaggcgctg
cggttggcccgcgacgtggtcaacaacccgtcagcgcagctgcggccgctgcaccccgag
cccggttcgcgagcggcggtcagcctgcgcttcgccaatgacgttctggccgaactggat
acgcgcaaacgccggctcggcgtgctgggctacgacgatctgctgacccggctggccgac
gcgctggccaccgagcactcccccgcccggctgcgcatgcaccagcgttggccgatcgtg
atggtcgacgagttccaggacaccgacccggtgcagtggcaggtgatcgaccgcgcgttc
agcggccgttcgacgctgattctcatcggcgaccccaagcaggcgatctacgcgtttcgc
ggcggtgacatcgtcacctacctgcgggcggccgagaccgcggggcagaaaaagacgctg
gacaccaactggcgcagcgattccgcgctgctgcagcggctgcaggtggtgctgcgcggc
gcgcagctcggtgaccccgcgatcgtggtgaacgacgtcgcggcgcaccaccggggtcac
cggctgtccggggcaccgcgcaacgacccgttccggctgcgggtggtgtcacgaaacacg
ttgggacgtcgcggtattgccaatcttcccatcgacgagctgcgacagcacatcggcgcc
gatctcgccgccgacatccgtgcgctgctggccgccggcgccaccttcgacgggaaaccg
gtgcgggcgggcgacatcgcggtcatcgtggaacggcaccgggacgcccaggcctgtttc
accgcgctgtgcgacgccggcgttcccgccgtctacaccggcaactccgacgtgttcacc
tcgcaggcggccgaggattggctgtgcctgctggaggcgttcgatcagccgcaccggccc
ggcgtggtgcgcgcggcggcggcgacgatgttcttcggcgagaccgccgagacgttggcg
gccggcggtgacgcgctgaccgaccggatcgcccagaccttgcgggagtgggccggtcac
gcccgcgaacgcggcgtcgccgccatcttcgaggccgcccagctgctggggatgggcaat
cgggtgctcggctggcagggcggggcgcggcacatgacggacctggcgcatctcacccag
ctgcttggcgaggtggcccattgcgaacaccacaacctgcccgcgctgcgcgactggctg
cgccggcagcgcgacgagcgaagcggcgcgccggaacgcaaccgccggttggacagcgac
gccgccgccgtccagatcatgaccgtcttcgtcagcaaggggctgcagtacccgatcgtg
tacctgccgttcgccttccaccgcaacaccaccgacagcgacgtggtgctgttccacgac
gaggacggcacccgctgcctgcacgtcggcggcaaggacagccccgacttcaaaaccgtt
gagcggcttggccgtaaggaggatgccagcgacgacagccggctgacgtacgtcgcgttg
acccgagcgcaggcccaggtggtggcgtggtggtcaccggcctaccacgagcccaacggc
ggcctgtcccggctgctgcggggccgccggcccggcgagccggtggtgccggaccgctgc
gagccggcgaagatctccgacgaggatgccctggctcggctgcgcgagtgggaggcggcc
ggcggcccggtcatcgaggaggcggtgccggcgccggcgccgccgctgcccggtgtgccg
gtgccggcacggctggagaaccgccacttccaccgcggcatcgacaccggttggcggcgc
acctcctattccggcctgatccggcaggcccagcccagcggggtgggcagcgaacccgag
gccgccgggctcgacgacgaggtcggcgacattcttctggccccggcgacatccgtcggc
gatgttgcctcgccgatggcggaccttccggcgggcgccaccttcggcaccctggtgcac
gccgtgctgcagacggccgacccgttcgcccccgacctggccgccgagctgaccgcccgg
atccgggagcactcggtgtggtggccggtggccgcgacccccgaagacatggccgcggcg
atggtgccgatgcacgacacaccgctgggcccgctggccggcggcctgacgctgcgccgg
atcgggttgtcggatcgcctgtgcgagctggacttcgagctgccgctggctggcggcgat
cggcgctcggccccgccggaggttcggctggccgatctggcgccgctgttgcgcgcgcat
ctgccggccgacgatgtgctggcctgctacgccgaccggctgacggaccgctccctcggc
gcggagtcgctgcgcggatacctgaccggctcgatcgacgccgtgctgcggatcccggac
ggggccgggcaccgctacctggtggtggactacaagaccaaccggctcggtgatgcgcag
cacccgctgaccgccgccgattacgaccggccccggatggtggaggcgatgttgcactcg
gattatccgctgcaggcgctgctgtacagcgctgtgctgcaccggttcctgcgctggcgg
ctggccggctacgatccggaccgccatctcggcggcatcctctatttgttcgtgcggggc
atgtgcggccccgacacgccggtgcgcgacggtcacccgtcgggcgtcttcgattggcga
ccgccgtcgtcgttgatcgcggcgctgtccgacctgctggatgcccagggggtggcggtg
tga
DBGET
integrated database retrieval system
