Mycobacterium avium 104: MAV_4544
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Entry
MAV_4544 CDS
T00433
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mav
Mycobacterium avium 104
Pathway
mav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAV_4544 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mav03400
]
MAV_4544 (recD)
Enzymes [BR:
mav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MAV_4544 (recD)
DNA repair and recombination proteins [BR:
mav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAV_4544 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
RecD_N
NAT10_TcmA_helicase
PhoH
AAA_16
SH3_13
AAA_28
nSTAND3
TrwB_AAD_bind
TraI_hel_assoc_N
Mg_chelatase
AAA_29
T2SSE
NTPase_1
AAA_5
SRP54
ATPase
MukB
DO-GTPase1
CbiA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ABK65724
UniProt:
A0A0H2ZVK8
LinkDB
All DBs
Position
4674395..4676107
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AA seq
570 aa
AA seq
DB search
MLPERVFDAGPLRPFADAGIFEAADIHVAQRLTALTGESDDRVALAVALLVRALRGGSVC
VDLRAVPAQVGAADLPWPAAGDWLAAVRASPLLGPPPVLRFFGDLLYFDRYWLEEEQVCT
DLLALSAPAGDVESSCYERLFPPGYEEQRAAARIAVSQALTVLTGGPGTGKTTTVARLLA
LLVEQAERAGEPRPRIALAAPTGKAAARLAEAVAAEIEHLDPADRARLAGLTGTTLHRLL
GPRPDTSVRFKHNRGNRLPHDIIVVDETSMVSLTMMARLAEAVRPDTRLILVGDPDQLAS
VEAGAVLADLVDGLAGRAGVRVAALATPHRFGSAIGALAAAIRAGDADRVVELLAAGGEH
IEWVDSERPADRLREVLVSHALRLRSAALLGAAQAALATLDEHRLLCAHRDGPHGAVRWN
TLVHNWIAEETGQPAWSQWYAGRPLLVTANDYGLRLYNGDTGVTVAGADGLRAVIAGAAG
PLDFATSRLGEVETMHAMTIHKSQGSQADEVTVLIPPEDSRLLTRELFYTAVTRAKSRVR
VVGPEASVRAAIERRAIRATGLRQRLRVVG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgttgccggagcgggtgtttgacgccgggccgctgcgcccgttcgccgacgccggcatc
ttcgaagcagcggatatccatgtggcgcaacggcttaccgcgctcaccggcgagtccgac
gatcgggtggcgctggccgtcgccctgctggtgcgcgcgctgcggggcggttcggtgtgc
gtcgatctgcgggcggtgccggcacaggtcggcgcggcggacctgccctggcccgccgcc
ggcgactggctggccgcggtgcgggccagcccgctgctcgggccgccgccggtgctgcgg
ttcttcggcgatctgctctacttcgaccggtactggctggaggaagagcaggtgtgcacc
gatctgctggccctgtcggcgccggcgggcgatgtcgaatcctcttgctacgaaaggctt
ttcccgcccggctacgaagaacagcgggcggccgcccggatcgcggtgtcccaggcgctc
accgtgctgaccggcgggccgggcaccggcaagaccaccacggtcgcgcggctgctcgcc
ctgctggtcgagcaggccgagcgcgccggtgagccgcggccgaggatcgcgctggccgcc
ccgaccggcaaggcggccgcgcggctggccgaggcggtggccgccgagatcgagcacctc
gacccggccgaccgggcgcggctggccgggctgaccggcaccacgctgcaccggctgctg
gggccgcgccccgatacgtcggtgcggttcaagcacaatcgcggcaaccggctgccacac
gacatcatcgtggtcgacgagacgtcgatggtgtcgttgaccatgatggcccggctggcc
gaagccgtccggccggacacccggctgatcctggtcggcgatcccgaccagttggcctcg
gtggaggcgggcgccgtgctggccgatctggtcgacgggctggccggccgcgccggggtg
cgggtcgccgcgctggccaccccgcaccggttcggcagcgcgatcggcgcgctggccgcg
gcgatccgggccggcgacgccgaccgggtggtggagttgttggcggccggcggtgagcac
atcgagtgggtggattccgaacgcccggccgaccggctgcgcgaggtgctggtgtcgcac
gcgctgcggttgcgctcggcggcgctgctgggcgcggctcaggccgcgctggccacgctg
gacgagcaccggctgctgtgtgcgcaccgcgacgggccgcacggggcggtgcggtggaac
acgttggtgcacaactggattgccgaagaaaccggtcagccggcctggtcgcaatggtat
gccgggcgtccgctgctggtgacggcgaacgactacgggctgcgtctgtacaacggcgac
accggcgtgacggtggccggtgcggacgggctgcgggccgtcatcgccggtgcggccggc
ccgctggacttcgccaccagccggctgggcgaggtggagacgatgcacgccatgaccatc
cacaagagtcagggcagccaggccgacgaggtgacggtgctgataccgccggaggattcg
cggctgctgacccgggaactgttctacacggcggtgacccgggccaagagcagggtgcgg
gtggtggggcccgaggcgtcggtgcgggccgcgatcgagcgccgggcgatccgggccacc
ggactgcggcagcggctgcgggtggtcgggtga
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