Muscardinus avellanarius (hazel dormouse): 308259917
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Entry
308259917 CDS
T11987
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform 1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
mave
Muscardinus avellanarius (hazel dormouse)
Pathway
mave04350
TGF-beta signaling pathway
mave04919
Thyroid hormone signaling pathway
mave05016
Huntington disease
mave05169
Epstein-Barr virus infection
mave05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
308259917 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
308259917 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
308259917 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
308259917 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
308259917 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mave03036
]
308259917 (SIN3A)
Chromosome and associated proteins [BR:
mave03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
308259917 (SIN3A)
REST complex
308259917 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
308259917 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
308259917
NCBI-ProteinID:
XP_080547382
LinkDB
All DBs
Position
3:complement(<139986681..>140046986)
Genome browser
AA seq
1277 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPTIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTTGQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKREKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENSNGATGGQLSTQASRSLLESAYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAEVWARWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKC
QRGREQQEKEGKEGNSKKTMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAH
QSHERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHF
VSINKYRVKYGTVFKAP
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtttggatgaccaggagtcaccggtgtatgcggcccagcagcgtcggatc
cctgggagcacagaggcatttccccaccagcaccgggtgcttgcccctgcaccacctgta
tatgaagctgtatctgaaaccatgcagtcagctactggaattcagtactcagtgacaccc
agttaccaggtttcagctgtgccacagagctctggcagtcatgggcccaccatagcagcg
gttcatagcagccatcatcacccaacagctgtccagccccatggaggccaggtggttcag
agtcatgcccatccagccccaccagttgcaccagtgcagggacaacagcaatttcagagg
ctcaaggtggaggatgcactgtcctatcttgaccaggtgaagctacagtttggtagtcag
cctcaggtctacaatgatttcctagacatcatgaaggaatttaaatctcagagcatcgac
actccaggagtgattagtcgtgtgtcccagctgtttaaaggccaccctgacctgatcatg
ggcttcaacaccttcttgcctcctggctacaaaattgaggtgcagaccaatgacatggtg
aacgtgacaactcctggccaggttcatcagatccccacccatggcatccagccccagcct
cagccaccaccccaacatccttctcagccttcagcccagtcagccccagctccagcccag
ccagctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacatact
ccagccagccagcagactcctccactcccaccatatgcatcaccacgttctccacccgtc
cagcctcatacaccagtgacaatctctttgggaacggctccatccttgcagaacaatcag
cctgtggagtttaatcatgccatcaactatgttaataagatcaagaacagattccaaggc
caacccgacatctacaaagcattcctggagattttgcacacatatcagaaagagcagcgc
aatgccaaggaagctggaggaaactatactcctgctttgactgagcaggaggtatatgcc
caggtggcgcgactctttaaaaaccaggaagatctattgtctgagtttgggcagtttcta
ccagatgccaacagctctgtgcttctaagcaaaacaactgcagagaaggttgattctgtg
agaaatgaccatggaggcactgtcaagaagccccagctaaacaacaagccacagaggccc
agccagaatggctgccagatccgaaggcactctggaacaggagccacccctccagtgaag
aagaaacccaaactgcttagccttaaggattcttctatggcagatgccagcaagcatggt
gttggaactgaatcattattttttgataaggtccgaaaggctttgcggagtgcagaggcc
tatgaaaattttctgcgctgtcttgttatctttaaccaggaggtgatttctcgggctgag
ctggtgcaactagtctctccttttctggggaaatttcctgaattgtttaattggtttaaa
aactttctgggctataaggaatctgtacatttggaaacttttccaaaggaacgagccaca
gaggggattgccatggaaatagattatgcctcttgtaaacggctgggctccagctatcga
gccctacccaagagttaccagcagcccaagtgtacagggcggactcctctctgtaaagag
gttttaaatgatacttgggtttccttcccgtcatggtctgaggactccacctttgttagt
tcgaagaagactcagtatgaagaacatatatatcggtgtgaagatgaacgctttgagctt
gatgtagttttagaaaccaacctggcaacaatccgggttctggaagcaatacaaaaaaag
ctttcccgcttatctgctgaggaacaagccaaatttcgtttggataacacccttgggggc
acgtcagaagtcatccatagaaaagcactccagaggatatatgctgataaagcagctgat
atcatcgatgggctgaggaagaatccctctattgctgttccaattgtccttaaaaggttg
aagatgaaagaggaagagtggcgggaagctcagaggggctttaacaaggtgtggcgagag
caaaatgagaagtactacttgaagtctctggaccatcagggcattaacttcaaacagaat
gacaccaaggtcctgaggtctaagagtttactcaacgaaattgagagcatttatgatgag
aggcaagagcaggctacagaagagaatgctggtgtacctgtgggcccacacctctcgctt
gcctatgaagataaacagatactggaagatgctgctgctctgattatccatcatgtgaag
agacaaacaggcattcagaaggaggacaagtataaaatcaagcaaatcatgcatcatttc
attccagatcttctctttgcccagagaggtgatctctcggatgtagaagaagaagaagaa
gaggagatggatgtagatgaagccacaggggcagccaagaagcacaatggtgttgggggc
agtccccctaaatccaaactactgtttagtaacacaacaggtcaaaagttaagagggatg
gatgaagtgtacaacctcttctatgtcaataacaactggtatatttttatgcgactgcac
cagattctctgcttaaggctgctgaggatttgttcccaagctgaacggcaaattgaggaa
gaaaatcgagaaagagagtgggaacgtgaggtgctaggcataaagagagaaaaaagtgat
agccctgccatccagttacgtctcaaagaacctatggatgttgatgtagaagattattac
ccagctttcttggatatggtgcggagtctgctcgatggcaacatagactcatcacagtat
gaagattcactgagagagatgttcaccattcatgcctacatcgccttcactatggacaaa
ctgatccagagcatcgtcagacagctgcagcacattgtcagtgacgagatctgtgtgcag
gtgactgacctttacctggcagaaaacagcaatggggccactggaggccaactcagcacg
caggcgtccaggagcctccttgagtcagcatatcagcggaaggcagagcagctcatgtca
gatgagaattgcttcaagcttatgttcattcagagccaaggccaggttcagctaaccatt
gagcttttggacacagaagaggagaactcagatgaccctgtggaagcagaggtatgggca
cgctggtcagactatgtggagcgatacatgaattctgatacaacctcccctgagcttcgt
gaacatctggcacagaagccagtatttctcccaaggaatctgcggcggatccggaagtgt
cagcgtggtcgggaacagcaggaaaaggaaggaaaagaaggaaatagcaagaagaccatg
gagaatgtggatagcttggataagctggaatgtagattcaagcttaattcctataagatg
gtatatgtgatcaagtcagaggactatatgtatcgcaggactgccttgctccgggctcat
cagtctcatgagcgtgtgagcaagcgcctacatcagaggttccaggcctgggtagataaa
tggaccaaggagcatgtgccccgtgaaatggcagcggagaccagcaagtggctcatgggt
gaggggctggagggcctggtgccctgcactaccacctgtgacacagagaccctgcacttt
gtgagcattaacaagtatcgtgtcaaatacggcacagtgttcaaagccccttaa
DBGET
integrated database retrieval system
