Muscardinus avellanarius (hazel dormouse): 308261196
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Entry
308261196 CDS
T11987
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04659
Th17 cell differentiation
mave04710
Circadian rhythm
mave05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
308261196 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
308261196 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
308261196 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mave03000
]
308261196 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mave03310
]
308261196 (RORC)
Transcription factors [BR:
mave03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
308261196 (RORC)
Nuclear receptors [BR:
mave03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
308261196 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DDE_Tnp_1_7
Motif
Other DBs
NCBI-GeneID:
308261196
NCBI-ProteinID:
XP_080549086
LinkDB
All DBs
Position
3:<116851860..>116893886
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AA seq
501 aa
AA seq
DB search
MDRAPQRQHRSTSRDLQAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQ
QCNVAYSCTRQQSCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQ
KQLQQQQQMQRDQVAKTPPAGGRGAEALTYTSGLPDGQLPLGASPDLPEASACPPGLLRA
SGSGPSYSNSLAKAEGGQSVYGTGSQLTPGTCGLHFEGPRHPGLGEPEQGPDGYCTSSFR
GTPEAPYASLTEIEHLVQNVCKSYRETCQLRLEDLMRQRANLFSREEVTSYQRKSVWEMW
ERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEVVLVRMCRAYNADNHTVF
FEGKYGGVELFRALGCSELISSIFDFCHSLSALRFSEDEIALYTALVLINAHRPGLQERR
KVEQLQYNLELAFRHHLCRTHRQGILAKLPPKGKLRSLCSQHMEKLHTFQHLYPIVVQAA
FPPLYKELFSTELESPEVLSK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacagcacagatccacctcgcgggacctgcaggctgccaag
aagacccacacctcacaaatcgaagtgatcccttgcaaaatctgtggggacaagtcctct
gggatccactacggggtcatcacctgtgaggggtgcaagggcttcttccgcaggagccag
cagtgtaacgtggcctactcctgcacccgccagcagagctgccccatcgaccgaaccagc
cggaaccgatgccagcactgccgcctgcagaaatgcttggccctgggcatgtcccgagac
gccgtcaaatttggccgcatgtccaagaagcagagggacagcctgcatgcggaggtacag
aaacagctgcagcagcagcagcagatgcagcgcgatcaagtggccaagacgcccccagcc
gggggccgcggggcggaggccctcacctacacctcggggctccccgatgggcagctgccc
ctgggcgcctcgcctgacctgcccgaggcctcggcctgtccccccggccttttgagagcc
tcgggctccgggccttcatattccaacagcttggccaaggctgagggcggccagagcgtc
tacggcacgggcagccagctcacccctggaacttgcggactccactttgaaggacccagg
catcccggccttggggaaccagaacagggtccagatggctactgcacctccagtttccgc
ggcaccccggaggcgccctatgcctccctgacggagatagagcacctggtgcagaatgtc
tgtaagtcctaccgagagacgtgtcaactgcgcttggaagacctgatgcgacagcgtgcc
aacctcttctcccgggaggaggtgaccagctaccagaggaagtccgtgtgggagatgtgg
gagcgctgcgcccaccgcctcaccgaggccatccagtacgtagtggagttcgccaagagg
ctgtcgggctttatggagctctgccagaatgaccagatcgtgctactgaaagcaggggca
atggaagtcgtgctggtcaggatgtgcagggcctacaacgctgacaaccacaccgtcttt
tttgaaggcaaatacggcggcgtggagctgttccgagccttgggctgcagcgagctcatc
agctccatcttcgacttctgccactctctcagtgccttgcgcttttctgaggatgagatc
gccctctacactgctctggttctcatcaatgcccatcggccagggctccaggagagaagg
aaagtcgagcagctgcagtacaatctggagctagcctttcgtcaccacctctgcaggact
catcgccaaggaatcctggcaaagctgccacccaaggggaagctccggagcctgtgcagc
cagcacatggagaagctgcacaccttccagcacctgtaccccatcgtggtccaagccgcc
ttccccccactctacaaggagctcttcagcactgaacttgagtccccggaggtgctgtcc
aagtga
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