Muscardinus avellanarius (hazel dormouse): 308261784
Help
Entry
308261784 CDS
T11987
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform 1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04014
Ras signaling pathway
mave04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
308261784 (SHOC2)
09133 Signaling molecules and interaction
04519 Cadherin signaling
308261784 (SHOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_5
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
308261784
NCBI-ProteinID:
XP_080550034
LinkDB
All DBs
Position
4:<143030166..>143075602
Genome browser
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDSKEKDPKVSSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHVLPPSIK
ELTQLTELYLYSNKLQSLPAEVGCLINLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVGGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatttaggaaaagaaaaagactctaaagagaaagatcccaaagtatcatca
gccaaggaaagagagaaagaagcaaaagcctctggtggttttgggaaggaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaagaaggactctagtgctgcc
caaccaggggtggctttttcagttgacaataccatcaaacgaccaaatccagcagctggg
actagaaaaaaatcaagtaatgcagaggtgattaaagagctcaacaaatgccgggaagag
aattcaatgcgtttggacttatccaagaggtctatacatgtattgccaccatcaatcaaa
gagttgactcaattaacagaactttatttatacagtaacaaattgcagtcccttccagca
gaggtgggctgcctaataaatctcatgacactggctctaagtgaaaattcactaaccagc
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacgacataataaa
ctgagagaaattccttcagtagtgtataggctagattctctcactactctctaccttcgc
tttaatcgtataactactgtggaaaaggacatcaaaaacctgtcaaaacttagcatgctt
agcattcgagagaacaaaatcaaacaactacctgctgaaattggtgaattatgtaacctc
attacgctggatgtagctcacaatcaacttgaacaccttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaactgctagaccttccagatactata
ggaaacttgtccagtttaagtcgccttggtctgagatataatagactgtcagcaataccc
agatcattagcaaaatgcagtgcacttgaagagttaaatttagagaacaataatatttct
actttaccagagagtcttttatcaagtcttgtaaaactgaatagcttgaccttagctaga
aattgctttcagttatatccagtgggtggtccatctcagttttccaccatctattccctc
aacatggaacacaatcgaatcaataaaatcccatttggaattttctccagagcaaaagta
ttaagtaagctgaatatgaaggacaatcagttaacatcacttcctttggattttggaact
tggaccagtatggtagaattgaatttagccacaaatcagcttacaaagatccctgaagat
gtatctggtcttgtttctcttgaggttctcatattatcaaacaatcttctaaagaagctt
ccccatggtcttggaaaccttaggaagttaagagaactggatctagaggaaaacaaattg
gaatccttgccaaatgaaatagcttatcttaaagatttacagaaattagtcttgacaaac
aaccagttgaccactcttcccagaggcattggtcaccttaccaatctcacacatctaggc
cttggagagaacctactgactcatcttcctgaggaaattggtacactggagaacctagaa
gaactgtatttgaatgacaaccccaacctgcatagccttccctttgagctggctctctgc
agcaagctttcaatcatgagtattgagaactgtccactcagtcaccttccacctcagatt
gttggtgggggaccttctttcatcattcagttcttaaagatgcagggtccgtatcgtgcc
atggtctga
DBGET
integrated database retrieval system
