Muscardinus avellanarius (hazel dormouse): 308264989
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Entry
308264989 CDS
T11987
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
mave Muscardinus avellanarius (hazel dormouse)
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mave03019
]
308264989 (GEMIN5)
03041 Spliceosome [BR:
mave03041
]
308264989 (GEMIN5)
Messenger RNA biogenesis [BR:
mave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
308264989 (GEMIN5)
mRNA cycle factors
P-body specific factors
308264989 (GEMIN5)
Spliceosome [BR:
mave03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
308264989 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT140_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Beta-prop_Aladin
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_NOL10_N
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_WDR35_TULP_N
PAC11
Beta-prop_Nup120_160
MIOS_WD40
NBCH_WD40
Beta-prop_VPS8
Beta-prop_EIPR1
WD_LRWD1
DNAI3_WD
Beta-prop_SCAP
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
308264989
NCBI-ProteinID:
XP_080554746
LinkDB
All DBs
Position
7:complement(<7761272..>7808757)
Genome browser
AA seq
1510 aa
AA seq
DB search
MGQEPRTLPPSPNWYCTRCSDAVPGGLFGFAARTSVFLVRVGPGAGAVPGTPPFRVVGEL
VGHTERVSGFAFSHHPGQYNLCATSSDDGTVRIWNVDTKAIVSEHALHQQTITALHWSPR
VKDLIVSGDEKGVVFCYWFNRKDSQHLFVEPRTIFCLTCSPHHEDVVAIGYKDGMVVVID
ISKKGDVIHRLRGHDDEIHSIAWCPLPGEECLPGNQEENSEEPGIPNGKVLAQTPVTEGC
YLATGSKDQTIRIWSCSRGRGVMTLKLPFLKRRGGGVDPAVKERLWLTLYWPENQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSTASEGQNHSRIVFNLCPLQTEDGKQLLLSTSMDRD
VKCWDLATLDCCWTLPSLGGFAYSLAFSPVDTGCLAIGVGDGMIRVWNTLSIKNNYDVRN
FWQGVKSKVTALCWHPDKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PVPTMSLGGEGDRPSLTLYSCGGEGVVLQHNPWKLSGEAFDINRLIRDTNSVKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPNLKLICTIQQHHKLVNAIAWHHELGSQPELSCLM
ASGSNNAVIYVHNLKAVLDSNPESPVTITEPYRTLSGHTAKITSLAWSPHHDGRLVSASY
DGTAQVWDVLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLPSMQDHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTLRTPTRQESLDGNEEDGKDLAEPAENGVSDQD
GEEDAPEPEPPCVLAATVSREPVNCAPVTSSLEKSKVTMNNKVTSAKKELPKEKADALLK
KRKARSMLPLSTGLDHRPKEELHRDCLALATAKHCEELNKDVSADLEERFHLGLFTDRAA
LYRMMDAEGKGHLDNGHPELFHQLMLWKGDLAGVLRSAAERGELTDSLVAMAPVAGYRVW
QWAVEAFAKQLCFQDQHVKAASHLLSIHKVYEAVELLKAHHAYREAIAVAKARLRPEDPV
LKDLYLTWGTILERDGHYAVAAKCYLGAASPYDAAKVLAKKGDAASLRTAAELAGIVGEE
ELSASLALRCAQELLLARNWVGAQEALQLHASLQSQRLVFCLLELLCRHLEEKQLPEGRS
SSSYHTWASSTDGPFVQRVTAAWRSGFGLDTPEQYRAAFEKLQNIKCPSATSNTPPRQLL
LHVCHDLALVVLSLQLASWDDAVRALLRAVVQSYDAGSFTVMQEVYSAFLPDGCDHLRDK
LHGQQSPAEPALRSLEAFLTYGRLYEIWWALPRPCPEASRWVRAAHPAPCVEHGGQADSA
EQAAPEAAAQPEPGRGPEPDCRLTEEGQRVLSACGELLSEQHASLQDARRTVAEVQETLA
EMIRRHQKSQLCRPAAGAPDGEAAQEAEQPHARPPSPCKEEENEPVSLPELTRRLTAANE
RMAKFPDSVKTWSFPDVLECCLVLLHVSSLCPGCVTLETQRQARELLQKYGSTNAYRRHC
RAFCTGAPGP
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggagccccgcacgctgccgccctctcccaactggtactgcacccgctgcagc
gatgcggtgcccgggggcctcttcggcttcgcggcgcggacctccgtcttcctggtccgc
gtgggccccggcgcgggcgcggtgcccgggacgcccccgtttcgagtcgtaggagagtta
gtgggacacacggaaagggtctctggcttcgcgttttctcatcatcctggtcagtacaac
ctctgtgccaccagctccgacgatgggactgtgagaatctggaatgtagacactaaagcc
atcgtgtcggaacatgcactccatcagcaaacaataacagcgctgcactggtctcctcgg
gtaaaggacctgatagtatctggggatgaaaaaggagtcgttttctgctactggtttaac
aggaaggacagccaacacctcttcgtagaacccaggaccatcttctgcctcacgtgctcg
cctcatcatgaagacgtggtggccatcggctacaaggatggcatggtggttgtaatcgac
atcagtaagaaaggagacgttattcacaggctccgaggccacgacgacgagatccactcc
atcgcctggtgtcccctgcctggggaagagtgtttgcccggaaatcaagaggaaaattca
gaagaacctggaatccccaatgggaaagttctagcacaaactccagtaacagaaggctgc
tacttagctactggaagcaaagaccagaccattcgaatctggagctgctctcgaggtcga
ggagtgatgactttgaaactgccctttctgaagaggcgaggagggggcgtggacccagct
gtcaaggagcgcctgtggctgacgctctactggccggagaatcagccaacacagctggta
tccagttgttttgggggggagctgctgctgtgggacctcacccagtcctggaggcggaag
tacaccctcttcagcactgcctccgaagggcagaaccactccagaatcgtgttcaactta
tgtcccctgcagaccgaggacggcaagcagctgctcctgtccacatccatggaccgagat
gtgaagtgttgggacctggccaccctggactgctgctggaccctgccctccctgggcggc
tttgcctacagcctggcgttctcccctgtcgacaccggctgcttggccatcggcgttggg
gacggcatgatccgggtgtggaacacactctccataaagaacaactacgacgtgaggaac
ttttggcagggcgtcaagtccaaggttacagcgctgtgctggcacccagacaaagaaggc
tgcttggcgtttggaactgacgacggaaaagtgggattgtacgacacctactccaacaaa
cctccacagatttctagcacctatcacaagaagactgtttacacgttggcgtgggggcca
ccagtacccaccatgtcacttggaggggaaggcgacaggccttccctcaccttatacagc
tgcggaggggaaggcgtcgtcttgcagcacaacccctggaagctgagcggggaggccttt
gacatcaacaggctcatccgggacaccaactcggtcaaatacaagttgcctgtgcacacg
gaaatcagctggaaagcagatggcaaaatcatggctcttggcaatgaagacggatccata
gaaatattccaggtccccaacctgaagctaatctgcaccatccagcagcaccacaagctg
gtgaacgccatcgcctggcaccacgagctcggcagccagcccgagctgagctgtctgatg
gcctcgggctccaacaacgccgtcatctacgtgcacaatctgaaagccgtcctagacagc
aatcccgagtccccagtgaccatcacggagccctaccggacactctcaggtcacacagcc
aagatcaccagcctggcgtggagcccacatcatgacggaaggctggtgtcggcctcctat
gacggcacggcccaggtgtgggatgtcctccgggaagagcccctgtgcaatttccgaggc
caccgaggccgactactgtgtgtggcgtggtccccgctggacccagactgcatctactcg
ggggcagatgacttctgtgtgtacaagtggctgccttccatgcaagaccactcccggccg
cctcaaggcaaaaaaagtattgaattagagaaaaaacggctctctcaaccgaagccaaag
cccaagaagaagaaaaagcccacgttgcgcacccctacgagacaggaatcgctggacggg
aacgaggaggacggcaaggaccttgcggagcctgccgagaacggggtgtcggaccaggac
ggggaggaggacgccccggagccggagccgccctgtgtcctcgcagccacggtttccaga
gagccagtgaactgtgctccagttacctcaagcttggaaaaatcaaaagtcaccatgaat
aacaaagtcacttcagcaaaaaaggagcttcctaaagagaaggcagacgcgttactgaag
aagaggaaggcgcgctccatgctgccgctgagcacgggcctggaccacaggcccaaggag
gagctgcaccgcgactgcctggcgctcgccaccgccaagcactgcgaagagctgaacaag
gacgtgtctgccgacctcgaggagcgatttcacctggggcttttcacagacagggccgcc
ctgtaccggatgatggacgctgaggggaaaggtcacttggacaacggtcatcccgagtta
tttcaccagctcatgctgtggaagggagatctcgcgggcgtcctccggagcgcggcggag
agaggagagctgactgacagcctggtggccatggcgcccgtagctggctaccgcgtgtgg
cagtgggccgtggaggccttcgccaagcagctgtgcttccaggaccagcacgtcaaggcc
gcctcgcacctgctgtccatccacaaggtgtacgaggctgtggagctgctcaaggcgcac
cacgcgtacagggaagccatcgcggttgccaaggcccggctgcgcccggaagacccagtt
ctgaaggacctgtacctcacctggggaaccatcctagaaagagatggccactatgccgta
gccgccaaatgctatttgggggccgcttccccttacgacgcagccaaagtcttggccaag
aagggggacgcagcgtcgctcaggacggctgcggagctggccggcatcgtgggagaggag
gagttgtctgcctcactggcgctcagatgcgcccaagagctgcttctagccaggaactgg
gtgggagcccaggaggccctgcagctgcacgccagcctacagagtcagaggctggtgttc
tgcctcctcgagctactgtgcaggcacctagaagaaaagcagcttccagaaggcagaagc
tcctcttcttaccacacctgggcctccagcacggacgggccctttgtgcaaagagtgacg
gcggcatggcggagcggctttggcctggacacacctgagcagtaccgggcagcctttgag
aagctgcagaacatcaagtgcccgtcggccacgagtaacacgccccccagacagctcctg
ctgcacgtgtgccacgacttggcgctggtggtgctgagtctgcagctggcctcctgggac
gatgccgtgcgcgcgctgctgcgggctgtggtccagagctacgatgcggggagcttcacc
gtcatgcaggaagtctactcggcctttctcccagacggctgtgaccacctgagagacaag
ctgcacggccagcagtctcccgccgagccggccctcaggagcttggaggcctttcttacc
tacgggcgtctgtacgagatctggtgggctctgcccaggccttgccccgaggccagccgc
tgggtgagggccgctcacccggccccctgtgtcgagcatggcggacaggcggacagtgcc
gagcaggctgcccccgaggctgccgctcagccagagcccggcagaggcccagaaccagac
tgcaggctcacggaggagggccagcgcgtgctgagcgcctgtggggagctcctgtccgag
cagcacgccagcctgcaggacgcgcggaggactgtggctgaggtgcaggagacgctggca
gagatgatccgccggcaccagaagagtcagctctgcagacccgccgccggcgctcctgat
ggcgaggctgcccaggaagctgagcagccccacgccaggcctccgagcccgtgtaaagag
gaggaaaatgagcccgtttctctgcctgaattaacgagaaggcttacagccgccaacgag
cgcatggccaagtttcccgacagcgtcaagacctggtccttccccgacgtgctggagtgc
tgtctcgtcctgcttcacgtcagctctctgtgccctggctgtgtgacactggaaacgcag
cgccaggcccgggagctccttcagaaatacggcagcacgaacgcgtacagaagacactgc
cgggccttctgcacgggagccccggggccctga
DBGET
integrated database retrieval system
