Muscardinus avellanarius (hazel dormouse): 308266158
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Entry
308266158 CDS
T11987
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave03022
Basal transcription factors
mave05016
Huntington disease
mave05017
Spinocerebellar ataxia
mave05165
Human papillomavirus infection
mave05166
Human T-cell leukemia virus 1 infection
mave05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
308266158 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
308266158 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
308266158 (TBP)
05165 Human papillomavirus infection
308266158 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
308266158 (TBP)
05017 Spinocerebellar ataxia
308266158 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mave03000
]
308266158 (TBP)
03021 Transcription machinery [BR:
mave03021
]
308266158 (TBP)
Transcription factors [BR:
mave03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
308266158 (TBP)
Transcription machinery [BR:
mave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
308266158 (TBP)
RNA polymerase III system
TFIIIB
308266158 (TBP)
RNA polymerase I system
SL1/TIF-1B
308266158 (TBP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
TFIIA
EPL1
DDHD
VPS13_N
DUF7518
Presenilin
DUF5693
CNDH2_M
Motif
Other DBs
NCBI-GeneID:
308266158
NCBI-ProteinID:
XP_080556303
LinkDB
All DBs
Position
8:<118587314..>118600306
Genome browser
AA seq
325 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQSAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQAVAVAAAAQQSAPQQTAQGASGQAPQLFHSQTLTTAPLPG
TTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNP
KRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFK
IQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG
AKVRAEIYEAFENIYPILKGFRKTA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcctacccccttacgctcagggcttggcctccccccagagtgcc
atgacccccggaattcccatctttagtccaatgatgccttatggcacggggcttacacca
cagcccattcagaataccaatagcctgtctattttggaagagcaacaaaggcagcagcag
cagcagcaacaacagcaacagcagcaacagcagcagcagcagcagcaacagcagcagcag
gcagtggccgttgcagcagcagctcaacaatcggcacctcagcagacagcacagggggcc
tctgggcaggccccacagctcttccactcacagactcttacgactgcacccttgccgggc
actacgcccctgtacccgtcccccatgacccccatgacgcccatcacccctgccacacca
gcctctgagagctctgggattgtgccgcagctgcaaaatattgtatccacagtgaatctt
ggatgtaaacttgacctaaagaccattgcacttcgtgcccgaaatgctgagtataatccc
aagaggtttgctgctgtgatcatgagaataagggagccacggaccacagcactgattttc
agttctggaaaaatggtgtgcacaggagccaagagtgaagaacagtccagactagcagca
agaaaatatgccagagttgtgcagaagttgggttttccagctaagttcttagacttcaag
attcagaacatggtgggtagctgtgatgtgaagttccccataaggttggaaggccttgtg
ctaacccaccagcagttcagtagttatgagccagagttatttcctggattaatctacaga
atgatcaaacccagaattgttctccttatttttgtttctggaaaagttgtattaacaggt
gctaaagtcagagcggaaatatatgaagcatttgagaacatctaccccattctaaagggg
ttccggaagacggcgtag
DBGET
integrated database retrieval system
