Muscardinus avellanarius (hazel dormouse): 308267656
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Entry
308267656 CDS
T11987
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform 1
KO
K16550
protein fantom
Organism
mave
Muscardinus avellanarius (hazel dormouse)
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mave01009
]
308267656 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mave03037
]
308267656 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
mave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
308267656 (RPGRIP1L)
Cilium and associated proteins [BR:
mave03037
]
Primary cilia and associated proteins
MKS complex
308267656 (RPGRIP1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
C2_C2CD3_N
CCDC3_C
INO80F
Motif
Other DBs
NCBI-GeneID:
308267656
NCBI-ProteinID:
XP_080558637
LinkDB
All DBs
Position
10:<32140249..>32246259
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AA seq
1271 aa
AA seq
DB search
MSGPTDETAGDLPVKDIGLNLFGVGGLQETSTTRTVKSRQAVSRVSREELEDRFLRLHDE
NILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLGRDVEMEEMVEQLQEKVH
ELERQNEVLRNRLISAKQQLQIQGHRQTPYNHVQSRINTGRRKAVENAGSQECSRKGIRF
QDVDVAETVQPMLTKYGNSLLEEAREEIRNLENVIQTQKGQIEELEHLAEILKTQLRRKE
NEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFIQLQEKQRTLR
ISHDALMANGDELNMQLKEQRLKCCSLEKQLHSMTFSERRVEELQDQINDLEKERELLKE
NYDKLYNSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLADKAEILDRAKTERDQNEKL
SQENRELQLQCLEQKQQLDELKNRMKFFNQESDINADELSEALLLIKAQKEQKNGDLSFL
EKVDNKITKDVERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTSKMENL
QQDYEIKVEQYVHLLDIRAARIQKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETIHL
ERGENLFEIHIHKVTFSSEAFQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQ
YLVHVNDLFLQYIQKNTVTLEIHQAYSTDYETIAACQLRFHEILERSGRIFCTASLVGTK
GDISNFGTVEYWFQLRVPMDQAIRLYRERAKALGYITSNFKGPEKMQSLSQQAPKTAQLS
STDSTDGNLNELHITVRCCNHLQSRASHLQPHPYVVYKFFDFADHDTAIIPSSNDPQFDD
HMCFPVPMNMDLDRYLKSESLSFYVFDDSDTQDSIYIGKVSVPLISLAHDRCISGIFELM
DHEKHPAGTIHVTLKWKFAYLAPSRSVTTEDLGHFLHREEPEAVQRLPPASSVGTSVVAP
RPKPRQRLTPVDKKVSFVDAIPHQISKETSPPPQDMKEISPEVEPTPDVEINTSTISHVP
KFSQENSISEVKENSEKIYQGKEDDVSVLSEGQLAQQSLASSDDETEVTEELEPEVEEDG
SASDSDDCIIPGPISKNIKQPAENILIEIIALNLNDSRITMDDTIQRLFVEYRFYSLPAE
ETPVSLPKPKSGQWVYYNYSSVIYVDEENNQAKRDILKAILQKQEMTNGSVRFTVVSDPP
EDEQELECEDIGFAHVNLADIFQKGRDIIEQNIDVFDARADGEGIGKLQVTVRALHALRS
VYEQYREDLEA
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccaaccgatgagactgcaggagacctgcctgtgaaagatataggtctaaat
ctctttggagtgggagggttacaagaaacctcaacaacacggacagtgaagtctcgccag
gctgtgtcacgtgtcagtcgtgaggaactggaagacagatttttgcgtttgcatgatgag
aacattttacttaaacagcatgcccgcaagcaagaggataaaattaaaagaatggccacc
aagttaatacggctagttaatgacaagaaaagatatgagcgggttggtggcggccccaag
cggttgggacgagacgtggaaatggaagaaatggttgaacagctgcaagagaaagttcac
gagcttgaaagacaaaatgaagtcctcaggaacaggctaatttcagccaaacagcaactc
caaatccagggccacaggcaaaccccgtacaatcatgtgcaatctcgtattaacacgggg
cgtaggaaagccgttgaaaatgcgggctcacaggagtgctccaggaaaggtataagattc
caggatgtagatgtagcagaaactgttcaacccatgcttacaaaatatggcaatagttta
cttgaagaagccagagaagaaataagaaatttagaaaatgttattcagacacagaaaggc
cagatagaagagttagaacatttggctgagatcctgaaaactcagttgaggagaaaggaa
aatgaaattgagttatctcttcttcagcttcgagaacagcaagctacagatcaaagatca
aatattcgggacaatgtagaaatgattaagcttcataaacaactagtggagaaaagtaat
gctctttcagtaatggaaggaaaattcattcagcttcaagagaagcaaagaactctcagg
attagccacgatgccttaatggcaaatggagatgagttaaatatgcaacttaaagagcag
cgcttaaaatgctgcagtcttgagaagcagttgcactccatgacattttctgaaagaaga
gtagaagagctacaggatcaaattaatgatttagaaaaagaacgagaacttttaaaggaa
aattatgacaaactttataacagtgccttcagtgctgcccatgaagagcaatggaagtta
aaggaacagcagctcaaagtgcagattgcgcagctcgagactgccctgaaatccgactta
gcagacaaagctgaaatcctagacagagcaaagactgaacgagaccaaaatgagaaactc
agtcaagagaacagagaactacagttacagtgtctggaacagaagcaacaactggatgaa
cttaaaaaccgcatgaagtttttcaaccaggagagtgatatcaatgctgatgaactgagt
gaagctctcctgctcataaaggctcaaaaagaacaaaaaaatggagacctttccttttta
gagaaagtggacaataaaattactaaagatgtagaacgctctatgagagagctgcaagca
actcatgcagaaacagtacaagaacttgaaaagacaagaaacatgctaattatgcaacat
aaaatcaataaagattatcagatggaagttgaggcagtgaccagtaagatggaaaatttg
cagcaagattatgaaatcaaggtagaacaatacgttcatcttcttgatatccgggctgca
cgtatccagaaactagaagcccaactaaaggacattgcctatggcaccaaacagtataag
tttaaaccagaaatcatgccagatgactctgttgatgaatttgatgaaaccatccaccta
gaacgaggcgaaaatctatttgaaatccacatccacaaagtaaccttttcttctgaagct
ttccaggcatctggagataaagagcctgtcactttctgtacctatgctttctatgatttc
gaacttcagacaactcctgtagtgcgaggccttcacccagaatataacttcacttctcag
taccttgttcatgttaatgatttattcttgcaatatattcagaagaatacagtcacactt
gagatccaccaagcttacagcacagattacgaaacaatcgcagcttgtcagttgaggttc
catgaaattctagaaagaagtggtcgaatattttgcacagcaagtttggttggaacaaaa
ggagacatctcaaattttggcacagtggaatactggttccaattaagagttcccatggac
caagcaattcgactttatcgagaacgagcaaaagctttgggatatataacatcaaatttt
aaggggccagagaaaatgcaatcgttaagtcagcaagcacccaaaactgctcagctcagt
tcaacagattccacagatggcaacttaaatgaacttcacattacagtaagatgttgcaac
cacctgcagtcccgagcaagtcacctgcagccacacccatacgttgtatacaagtttttt
gatttcgcagaccatgatacagccatcattcccagtagcaatgatccacagtttgatgat
catatgtgtttcccagtgccaatgaatatggatttggatcgataccttaagtcagagtct
ctgagtttttatgtgtttgatgatagtgatacccaggacagtatttacataggaaaagtc
agtgtgcctctgatttccttggcacatgacaggtgtatctcaggtatatttgagttaatg
gatcatgaaaagcatcctgcaggcaccattcatgttacactgaaatggaaattcgcttac
cttgcaccaagtagatcagtaactactgaagacttaggacatttcctacaccgagaagag
ccagaagctgttcagaggctacctccagcatcctctgttggcacatcagttgtagcacca
agacctaaaccaagacaacgtttaacacccgtagataagaaagtgtcttttgtggatgcc
ataccacatcagatttctaaggaaacttctcctcctcctcaagatatgaaggaaatttca
ccagaggtggagcctacaccagatgtagaaatcaatacatcaactatttcacatgttcca
aagttttcacaagaaaacagtatctctgaggtaaaagagaattctgagaaaatatatcaa
ggaaaagaagatgatgtatctgtactatctgagggtcagcttgcacagcagagcttggca
tcttctgatgatgaaacggaagtgacagaggaattggaaccagaagttgaagaggacgga
tcagcttctgacagtgatgactgtattattccaggtcctatctccaaaaatatcaaacag
ccagcagagaacattctgattgagattatagctttaaacctgaatgattctcgaataacc
atggatgacactatacagcggctatttgttgagtaccgattctacagtcttcctgctgaa
gagacgcccgtgtcactcccgaaacctaagagtgggcagtgggtctactataactatagc
agtgtgatctatgtggatgaagaaaacaaccaagcaaagagagacatcttaaaagctata
ctacaaaaacaagaaatgactaacggaagtgtccgcttcacagtggtcagcgaccctcca
gaagacgaacaggagctggagtgcgaggatatcggctttgctcacgtcaacctcgcagac
atattccagaaagggagagacatcattgagcaaaatattgacgtttttgatgcacgagca
gatggtgaaggtattggcaagctccaggtgacagtcagagctctccatgccctacggtct
gtctatgagcagtacagagaggacctggaggcttga
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