Muscardinus avellanarius (hazel dormouse): 308267671
Help
Entry
308267671 CDS
T11987
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mave
Muscardinus avellanarius (hazel dormouse)
Pathway
mave03030
DNA replication
mave03410
Base excision repair
mave03420
Nucleotide excision repair
mave03430
Mismatch repair
mave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308267671 (POLD1)
03410 Base excision repair
308267671 (POLD1)
03420 Nucleotide excision repair
308267671 (POLD1)
03430 Mismatch repair
308267671 (POLD1)
03440 Homologous recombination
308267671 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mave03032
]
308267671 (POLD1)
03400 DNA repair and recombination proteins [BR:
mave03400
]
308267671 (POLD1)
Enzymes [BR:
mave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
308267671 (POLD1)
DNA replication proteins [BR:
mave03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
308267671 (POLD1)
DNA repair and recombination proteins [BR:
mave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
308267671 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
308267671 (POLD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
308267671
NCBI-ProteinID:
XP_080558663
LinkDB
All DBs
Position
10:<62155793..>62168207
Genome browser
AA seq
1107 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARGDLWDEDEPPPASSFEEDLALMEEMEAEHRLQEQEEEALQS
APEGATDGQFSSAAIDPRWLRPTPPHLDPQTEPLIFQQLEIDHYVGPARPLPGGPPPSRG
SVPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGTEHLSDLQRELNAAISRDQRGGK
ELSGLAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPS
FAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYVLRATEKATLCQLEADVLWSDVVSHPP
EGTWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEKEEELLQAWSTFVRNMDPDVITGYNIQNFDLPYLISRAQTLKVAAFPF
LGRVTGLRSNIRDSSFQSKQMGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAVEMARVTG
VPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTADEFIKTPTGDEFVKTSVRKGLLPQIL
ENLLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTTENGYSADAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLVDRDPEGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLN
HQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLEDQDQLLRRFGPPGSEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcggccaggcccgggtcctggggtgcccccaaagcgggcccgtggg
gacctctgggatgaggatgagccccctccggcatcctcgtttgaggaggacctggcgctg
atggaagaaatggaggcagagcacaggctgcaggaacaagaggaggaggcactgcagtca
gctccggagggggctacggatgggcagttctcctcggcagccatagatccccgctggctg
cggcccaccccgccacacctggacccccagacagagccgctcatcttccagcagctggag
atcgaccattatgtgggcccagcgcggcccctgccagggggccccccaccatcccgtggc
tctgtgcctgtgctccgggccttcggggtcaccgatgagggcgtctccgtctgctgccac
atccacggctttgcgccctacttctacaccccagcaccccccggtttcgggacagagcac
ctgagtgacctccagcgggagctcaatgcggccatcagcagggaccagcgtggcgggaag
gagctcagcggcctggcggtgctggccgtggagctgtgctcgcgggagagcatgttcggg
taccacgggcacggcccctcgcccttcctgcgcatcaccctggcgctgccccgccttgtg
gcccctgcccgccgcctcctggagcagggcatccgtgtggccggcctgggcacccccagc
ttcgcgccttatgaggccaacgtggacttcgagatccggttcatggtggatacagacatc
gtcggctgcaactggctggaactcccagctgggaaatacgtcctgagggcaacagaaaag
gccacgctgtgccagttggaggcagatgtgctgtggtcagacgtggtcagtcacccccca
gaagggacgtggcagcgcatcgcacccctacgtgtgctcagcttcgacatcgagtgcgct
ggtcgcaaaggcatcttccctgagcctgagcgggaccctgtgatccagatctgctcgctg
ggcctgcgctggggtgagccagagcccttcctgcgtctggcactcaccctgcggccctgt
gcgcccatcctgggtgccaaggtgcagagctatgagaaggaagaggagctgcttcaggcc
tggtccacctttgtccgcaacatggaccccgatgtgatcaccggctacaacattcagaac
tttgacctcccctacctcatctcccgggcccagaccctcaaggtggcggcctttcctttc
ctgggccgtgtgaccggcctccgctctaacatccgggactcgtcgttccagtccaagcag
atgggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgctg
caggtgctgctgcgggagtacaagctccgctcctacacgctcaacgcggtgagcttccac
ttcctgggcgagcagaaggaggacgtccagcacagcatcatcaccgacttgcagaatgga
aacgaccagacccgtcggcgcctggccgtgtactgcctcaaggacgccttcctgccgctg
cggctgctggagcggctcatggtgctggtaaacgccgtggagatggcgcgggtcactggc
gtgcccctcggctacctgctcagccggggccagcaggtcaaggtcgtgtcccagctgctg
cgtcaggccatgcgtgaggggctgctgatgcccgtggtcaagacggagggcggcgaggac
tacaccggagctaccgtcattgaacccctcaaagggtactacgacgtccccatcgccacc
ctggacttctcctcactgtacccatccatcatgatggctcacaacctgtgctacaccacg
ctgctgcggcccggggccgcccagaagctgggcctgactgcagacgagttcatcaagacg
cccacgggggacgagtttgtgaagacctcggtgcggaaagggctgttgccccagatcttg
gagaaccttctcagcgcccggaagagggccaaggctgagctggcccaggagacagacccc
ctgcgacggcaggtcctggatgggcggcagctggcgctgaaggtgagcgccaactccgta
tacggcttcaccggtgcccaggtgggcaagttgccatgcttggagatctcacagagtgtc
accgggtttgggcgccaaatgattgagaaaaccaagcaactggttgagtccaagtatacc
acggagaacggctacagcgctgatgccaaggtggtgtacggcgacaccgactccgtcatg
tgccgatttggcgtctcctctgtggccgaggccatggccctggggcgggaggctgcagac
tgggtctcaggtcacttcccgccgcccatccggctcgagtttgagaaggtctatttcccc
tacctgctcatcagcaagaagcgctacgccggcctgctcttctcctcccggcccgacgcc
cacgatcgcatggactgcaagggcctggaggctgtgcgcagggacaactgccccctggtg
gccaacctcgtcacggcctcgctgcgccgcctgctagtggaccgagaccccgagggtgcc
gtggcccacgcaaaggacgtcatctcagacctgctgtgtaaccgcatcgacatctcccag
ctggtcatcaccaaggagctgacccgcgccgcggctgactacgccggcaagcaggcccat
gtggagctggccgagaggatgaggaagcgggaccccgggagcgcgcccagcctgggcgac
cgtgtcccctacgtgatcatcggcgctgccaagggcgtggccgcctacatgaagtcggag
gaccccctcttcgtgctggagcacagcctgcccatcgacacacagtactacctggagcag
cagctcgccaagccgctcctgcgcatcttcgagcccatcctgggcgagggccgcgcggaa
tctgtgctgctgcggggtgaccacacacgctgcaagaccgtgctcaccggcaaggtgggc
ggcctcctggcctttgccaagcgccgcaactgctgtatcggctgccgcacggtgctcaac
catcagggagccgtgtgcgagttctgccagccccgggagtctgaactttatcagaaggag
gtgtcccacctcaacgccctggaggagcgcttctcacgcctctggacccagtgccagcgc
tgccagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttctac
atgcgcaagaaggtgcggaaggacctggaggaccaggatcagctgctgcgccgcttcgga
ccccccggctccgaggcctggtga
DBGET
integrated database retrieval system
