Muscardinus avellanarius (hazel dormouse): 308268982
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Entry
308268982 CDS
T11987
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 isoform 1
KO
K13175
THO complex subunit 6
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave03013
Nucleocytoplasmic transport
mave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308268982 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
308268982 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mave03019
]
308268982 (THOC6)
03041 Spliceosome [BR:
mave03041
]
308268982 (THOC6)
Messenger RNA biogenesis [BR:
mave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308268982 (THOC6)
Spliceosome [BR:
mave03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308268982 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_NOL10_N
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_EML_2
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR54
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
ASA1
Beta-prop_Vps41
TRM82_WD
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
308268982
NCBI-ProteinID:
XP_080560222
LinkDB
All DBs
Position
10:complement(<111060222..>111064058)
Genome browser
AA seq
341 aa
AA seq
DB search
MERAAPPAGPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESRKPVVTFQAHDGPVYSMLSTDRQLLSAGDGEVKAWLWAEIVKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTQAFRGHTDYIHCLALRERS
PEVLSGSEDGSVRLWDLRTAKEAQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgccgcgccgcccgcggggccgctgggccaggcagaggtgtttcaggccctg
cagcgtctgcacatgaccatcttctcccagagtgtctcaccctgtgggaagttcctggcg
gctggcaataactacgggcagatcgccatcttcagcctatctgctgctttgagctcagag
gccaaagaggagagcaggaagcctgtggtgaccttccaagcccacgatggacccgtctac
agcatgctctccaccgacagacagctgctcagtgccggggacggggaggtgaaggcctgg
ctctgggcagagatcgtcaagaagggctgcaaggaactgtggcggcggcagcccccatac
aggaccagcctggaggtgcccgagatcaacgccctgctgctggtccccaaggagaactcc
ctcattctggcagggggagactgccagctacacaccatggacctggaaaccggggcattc
acgcaggccttccggggccacacagactacatccattgtctggcactgagggaacggagc
cccgaggtgctctcaggcagcgaggacgggtctgtgcgcctctgggacctccgaaccgcc
aaagaggcccagacgattgaggtgtacaaacacgaggagtgctccaggccccacaatggg
cgctggattggatgcctggcaactgactcagactggatggtctgtggagggggcccagcc
ctcacgctctggcacctccgctcctccacgcccaccaccgtcttccccatgcgggcaccg
cagaagcacgtcaccttctaccaggatctgattctgtcggctggccagggccgctgtgtc
aaccagtggcagctgagtggggagctcaaggcccaggtgccgggctcctccccggggctg
ctcagcctcagcctcaaccagcagcccgcagcacccgagtgcaaggtcctgacagccgca
ggcaacagctgccgggtggacgtcttcaccaacttgggctaccgggccttttccctgtcc
ttctga
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integrated database retrieval system
