Muscardinus avellanarius (hazel dormouse): 308270371
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Entry
308270371 CDS
T11987
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
308270371 (SHANK3)
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Ortholog
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GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
308270371
NCBI-ProteinID:
XP_080562351
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All DBs
Position
11:complement(<96869..>165977)
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AA seq
1794 aa
AA seq
DB search
MQLSRAAAAAAAAAEPPEPPSAAAPPGPLPRSAAGGAPAGGQGGPGRRAESPRAPSAAPS
GPGPGAGMDGPGASAAVVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALSHRLQDALNY
GLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTK
ANLKKFMDYVQLHSTEKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDLLKVLRNGG
AHLDFRTRDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCC
ELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNTALHICALY
NQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRETPSYA
KRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQEEKDRDR
DGDQEDDIGGSSAGRSGQSKISPSGAPGPGPAPPAPPAPPPRGPKRKLYSAVPGRKFIAV
KAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRHCDTRRET
REDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFVLRGAKAETPIEEFT
PTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVDVVKVGHKQVVALIRQGGNRLVM
KVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDEILA
AAAEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGIPR
TKSVGEDEKLASLLEGRFPRSSSMQDPGREGRGIPPPPQTAPPPPPAPYYFDSGPPPAFS
PPPPPGRAYDTVRSSFKPGLEARLGAGPPGLYEPGAALGPLPYPERQKRARSMIILQDSA
PEAAELPRPAPAATPPERPKRRPRAAGADSPYANLGAFSASLFAPSKPQRRKSPLVKQLQ
VEDAQERAALAVGSPGPGGGSFARDPSPTHRGPRQGLGGLDFGAGDVGLAFGGPGPGPGK
ERRLEERRRSTVFLSVGAIEGSPPSAELPSLQPSRSIDERLLGAGPTAGRDLLLPSPVSA
LKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDA
DRPGPLFVDVQARDAERGALASPAFSPRSPAWIPVPARREAEKVPREDRKSPEDKKSMIL
SVLDTSLQRPAGLIVVHATSNGQEPGRLGAEEERPGTPELAPAPMQTAAVAEPLPSPRAQ
PPGSTPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANGI
LLATPPPGPGPLPTTVPSPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLETTSTIS
TVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQS
SDSELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVIREL
SSRLQQLSKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLSELSTISAQRSPGGPDG
GASYPVRPSGRYPVARRAPSPVKPASLERVEGLGAGAGGVGRPFGLTPPTILKSSSLSIP
HEPKEVRFVVRSVSARSRSPSPSPLPSPSPGPSPGAPGPRRPFQQKPLQLWSKFDVGDWL
ESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLDGS
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgccgccgagcccccggagccgccg
tccgccgcggccccccccggccccctcccgcgcagcgcggccggcggggccccggcgggg
ggccagggggggccggggcgccgcgccgagtccccgcgcgccccctctgcggccccgagc
ggcccgggcccgggcgcggggatggacggccccggggccagcgccgcggtcgtgcgcgtc
ggcatcccggacctgcagcagacgaagtgcctgcgcctggaccccgccgcgcccgtgtgg
gccgccaagcagcgcgtgctctgcgcgctcagccaccgcctgcaggacgcgctcaactac
gggctcttccagccgccctcccggggccgcgccggcaagttcctggacgaggagcggctg
ctgcaggactacccgcccaacctggacacgcccctgccctacctggagtttcgatacaag
cggcgggtttatgcccagaacctcattgatgacaagcagtttgcaaaactgcacaccaag
gcaaacctgaagaagttcatggactatgtccagctgcacagcacagagaaggtagctcgc
ctgctggacaaagggctggaccccaatttccacgaccctgattcaggagagtgccctctg
agcctggcggcccagctggataatgccacagacctgctgaaggtgctaaggaacggcggt
gctcacctggacttccgcacccgcgacgggctaaccgctgtgcactgtgccacccgccag
cggaatgcgggggcgctgacgactctgctggacctgggcgcttctcccgactacaaagac
agccgaggcctgacgcccctgtaccacagtgccctgggaggcggggacgccctctgctgc
gagctgcttctccatgatcacgcacagctggggaccactgacgaaaatggctggcaggag
atccaccaggcctgccgcttcgggcatgtgcagcacttggaacacctgctgttctatgga
gccaacatgggcgcccagaacgcctcggggaacacagccctgcacatctgtgcactctac
aaccaggagagctgtgcccgggtcctgcttttccgaggagccaataaggatgtccgcaat
tacaacagccagacagccttccaggtggccatcattgcagggaactttgagcttgcagag
gtcatcaagacccacaaagactcagatgtcgtaccattcagggaaacccccagctatgcc
aagcggcggcgactggctggccccagtggcttggcgtcccctcggcctctgcagcgctcg
gccagtgacatcaacctgaagggcgaggtgcagccagcagcctctcccgggccctcgctg
cggagcctcccgcatcagctgctgctccagcggttgcaggaagagaaagatcgtgaccgg
gatggtgaccaggaggatgacattggtggctcttcagcaggcaggagcggccagagcaag
atcagccccagcggcgcgcccggccccggcccggcgccccccgcgccccccgcgccgccg
ccccggggcccgaagcggaaactttacagcgccgtgcccggccgcaagttcatcgccgtg
aaggcgcacagcccgcagggcgagggcgagatcccgctgcaccgcggcgaggccgtgaag
gtgctcagcatcggggagggcggcttctgggaggggaccgtgaagggccgcacaggctgg
ttcccggccgactgcgtggaggaggtgcagatgcgacactgtgatacccggcgtgaaacc
cgggaggaccgaacgaagaggcttttccgccactacacagtgggctcctatgacagcctc
acgtcacacagtgattatgtcatcgatgacaaagtggctattctgcaaaaacgggaccac
gagggcttcggctttgtgctccggggggccaaagcagagacccccattgaggagttcacg
cccacaccggccttcccagcactgcagtacctggagtctgtggatgtggagggtgtggcc
tggagggctgggctgcgcacgggggacttcctcattgaggtaaacggagtggacgtcgtg
aaggtcgggcataagcaggtggtggccttgatccgccagggtggcaaccgcctggtcatg
aaagttgtatctgtgaccaggaagccagaggaggatggggctcgtcgaagagccccaccg
ccccccaagagggctcccagcaccacgctgaccctgcgttccaagtccatgacggctgag
ctcgaggaacttgcctccattcggagaaggaaaggggagaagctggatgagatcctggca
gctgctgcagagccagcgctgaggcccgacatcgcagatgccgactcgagagcagctacc
gtcaagcagcggcccaccagccggaggatcacccctgcggagatcagctcattgtttgag
cgccagggcctcccgggcccagagaagctgccgggctctctgcggaaggggattccacga
accaagtctgtaggggaggacgagaagctggcgtccctgctggaagggcgcttcccgcgg
agctcgtccatgcaggacccggggcgcgagggccgcggcatcccgcccccgccgcagacc
gcgccgccgccgccgcccgcgccctactacttcgactcggggccgccgcccgcgttctcg
ccgccgcccccgccgggccgcgcctacgacaccgtgcgctccagcttcaagcccggcctg
gaggcgcgcctgggcgccgggccccccggcctgtacgagccgggcgcggccctcgggccc
ctgccctaccccgagcggcagaagcgcgcgcgctccatgatcatcctgcaggactccgcg
cccgaggcggccgagctcccgcggcccgcgcccgccgccacgccgcccgagcgccccaag
cgcaggccgcgcgccgcgggcgccgacagcccctacgccaacctgggcgccttcagcgcc
agcctcttcgcgccgtccaagccgcagcgccgcaagagcccgctggtgaagcagctgcag
gtggaggacgcgcaggagcgcgcggcgctggccgtgggcagccccgggcccggcggcggc
agcttcgcccgggacccctcgcccacgcaccgcgggccgcggcagggcctgggcggcctg
gactttggcgccggcgacgtggggctcgcgttcggcggcccgggcccgggccccggcaag
gagcggcggctggaggaacggcgccgctccactgtgttcctgtcggtgggcgccatcgag
ggcagcccgcccagcgccgagctgccctccctgcagccgtcccgctccatcgacgagcgc
cttctgggggctggccccaccgccggccgcgacctgctgctcccctcccccgtctctgct
ctgaagccattggtcagcggtccaagccttgggccctcgggctccaccttcatccatccg
ctcaccggcaagcccctggaccctagctcgcccctggcccttgccctggctgccagagag
cgggctctggcatcccaggcgccctcccgatcgcccacacccgtgcacagccctgatgcc
gaccggcctggacccctcttcgtggatgtacaggcccgggatgcggagcgaggggccctg
gcctccccagccttctccccgcggagcccggcttggattcctgtgcctgcacgcagggag
gccgagaaagtcccccgggaggatcggaagtcccccgaagacaagaagtccatgatcctc
agcgtcttggacacgtcactgcaaaggccagcgggcctcatcgtcgtacacgccaccagc
aatgggcaggagcccggccggctgggggctgaagaggagcgcccgggcaccccggagctg
gccccagcccccatgcagacggcagctgtggcagagcccctgcctagcccccgggcccag
ccccctggaagcaccccagcagaccccgggccgggccagggaagctcagaagaggagcca
gagctggtgtttgccgtgaacctgccaccggcccagctttcctccagcgacgaggaaacc
agggaagaactggcccgcatcgggttggtgccaccccctgaagagtttgccaatgggatc
ctgctggccaccccaccccctggcccgggccccttgcccaccacggtgcccagcccggcc
tcaggaaagcccagcagcgagccgccccctgcccctgagtctgcagcggactctggggtg
gaggaggctgacactcgaagttccagtgacccccacctggagaccacaagcaccatctcc
acggtgtccagtatgtccactctgagctcggagagcggggaactcaccgacacccacact
tccttcgccgacggacacacttttctactcgagaagccaccagtgcctcccaagcccaag
ctcaagtccccgctggggaaggggccggtgaccttcagggacccactgctgaagcagtcc
tcggacagcgagcttatggcccagcagcaccacgccgcctctgctgggctggcctctgcc
gccgggcctgctcgccctcgctacctcttccagagaaggtccaagctgtggggggacccc
gtagagagccgggggctccccgggcctgaggatgacaaaccaactgtaatccgtgagctc
agctcccgcctgcagcagctgagcaaagacacgcgctccctgggggaggagccggctggc
ggcctcggtggtctgctggaccctgccaagaagtcgcccatcgcagcagctcggctcttc
agcagcctcagtgagctgagcaccatctcagcgcagcggagccctgggggccctgacggc
ggggcctcctacccagtgcggcccagcggccgctaccccgtggcgcgacgcgcccccagc
ccagtgaagcccgcgtcgctggagcgggtggaggggctgggggcgggcgcgggcggtgta
gggcggcccttcggcctcacgcctcccaccatcctcaagtcgtccagcctctccatcccg
catgagcccaaggaggtgcgctttgtggtgcgcagcgtgagcgcgcgcagccgctcgccc
tcgccgtcgccgctgccctctccttcgcctggccccagccccggagcccccgggccccgg
cggcccttccagcagaagccgctgcagctctggagcaagttcgacgtgggcgactggctg
gagagcatccacctaggcgagcaccgcgaccgcttcgaggaccatgagatcgagggcgcg
cacctgcccgcgctcaccaaggatgacttcgtggagctgggagtcacccgcgtgggccac
cgcatgaacatcgagcgcgcgctcaggcagctggatggcagctga
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