Muscardinus avellanarius (hazel dormouse): 308270929
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Entry
308270929 CDS
T11987
Symbol
ARHGEF40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
mave Muscardinus avellanarius (hazel dormouse)
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mave04131
]
308270929 (ARHGEF40)
Membrane trafficking [BR:
mave04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
308270929 (ARHGEF40)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
RHG20_PH
IQ_SEC7_PH
PH_10
Motif
Other DBs
NCBI-GeneID:
308270929
NCBI-ProteinID:
XP_080563207
LinkDB
All DBs
Position
12:<25913276..>25943041
Genome browser
AA seq
1622 aa
AA seq
DB search
MSGRWGRPRPGASEGQGGGCPRGGGGRGGRAGGAAGVPRRAGAAPGAGRGGAGRRPSRPS
LAGPRGLERGGRAATAGAVPGQSREPRRREGGGGAPAPARRPAERQAMEPEPVEDCVQST
LAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLAKVQQEACAQYSGF
LFLHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLALKCLAPGGGRVQE
LPVPNEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGVQRLPWAELICPQFVHKEGLM
VGHQPSTLPPELPSGPPPGLPSPPLPEEVLGTRSPGDGHNAPAEGPEGEYVELLEVTLPT
RGSPTDAEGSSGLSRTRTVPTRKSAGGKGRHRRHRAWMHQKGPGARDQDGGARPPGEGSS
TRASPGSPPGAEAVPEAAVLEAPEPPAEALGEASEATPPRPAEAGGAGQGPEGPPGTPRR
TGKGNRRKKRAAGRGALNRGGDSAPLSPGDKEEASRQEALANPPSPNEQELLESCLEKEA
IGGSGKLDSELKEELTPTDEKEPPPSEDCVPTEEGAGEREQAGSSPASAADPAGIPSDPP
TQALETEQEVKGGSVPEEAPPVSISDGPDVAWDLMASGFLVLTGGVDQSGRALLTITPPC
PSQEPPPSQETLSSTLRYLHSLLRPDLQSVGLSVLLDLRKAPPLPPALIPALNQLQDSGD
PLIQRLLILTQGDPPSELCGFQGAELLTQNDLKKVAKPEELQWDLGGHRATSPSHWVEIH
QEVTRLCRLCRGVLSAVQQATQELEGALELEAEEAGSMPDPLQKVLADPRLTALQRDGGA
ILMRLRSTHSSKLEGPGPATLYQAVDEAIHQLVRLSNLHVQQQERRQRLHQLQQVLDWLS
GPAEEQLDSFALPGDSLSALQEVELRFRAFTAEVQTRLAQAREALALEESSASQKVLDIF
EQRLEQIESNLHRALRLQRFFQQANEWVDEGSARLAGAGSGREAVLAALALRRAPEPSAG
TFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGQRRRRADSASSAG
AQRGSHSPSPSLGSLLLPSSPGPRAAPSHCSLAPCGEDCEEEGPERATEADGRPPRPVLI
RGLEVTSTEVVDRTCSPREHVLLGRAGGPEGPWGVGTPRMERKRSISAQQRLVSELIACE
QEYVTTLSEPVPPPGPELTPELRGTWAAILSARERLRSFHRTHFLQELQGCAAHPLRIGA
CFLRHGDQFSLYAQYVKHRHKLENGLAALSPPAKGLLEGGPYLPRALQQPLEQLARYGRL
LEELLREAGPELSSERQALGAAVQLLREQEARGRDLLAVEAVRGCEIDLKEQGQLLHRDP
FTVICGRKKCLRHVFLFEHLLLFSKLKGSEGASETFVYKQAFKTADMGLTENIGDSGLCF
ELWFRRRRAREAYTLQATSPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFL
DIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDV
KQISLAPETLDSSGDVSPGPRNSPSLQTTHPGSSTPTLASGGIFGLSRQTHARALSDPTT
PL
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagatgggggcgtcctcggccgggcgcctccgagggtcagggtggcggctgc
ccacgggggggcggggggcgcggcgggcgggcggggggcgcggcgggggtcccgcgccgg
gcgggcgcggcgccgggggcggggcggggcggggcggggcggcggccgtctcggccctcc
ctggcggggccccgcggcctggagcgcggcggccgagccgccaccgcgggcgctgtcccc
ggccagagccgagagccgcggcggcgggagggaggcggaggagcgccggcccccgcccgc
cggcccgcggagcgccaggccatggagcctgagccagtggaagactgtgtgcagagcaca
ctcgctgccttatacccaccgtttgaagccacggcccccaccctgttgggtcaggtgttc
caggtggtggagaggacgtatcgggaggacgcgctgaggtacacgctggacttcctggta
ccagccaaacacctgcttgccaaggtccagcaggaagcttgtgcccagtacagcggattc
ctcttcttgcacgagggctggccactctgcctgcacgagcaggtggtggtgcagctagca
gctctgccctggcagctgctgcgcccaggagacttctacctgcaagtggtgccctccgca
gcccaagcaccccgtctggctctcaagtgtctggccccagggggcggacgggtccaggag
ctgcccgtgcccaatgaggcttgtgcctacctgttcacacctgagtggttgcaaggcatc
aacaaggaccggcctacagggcgcctcagcacctgcctcctgtctgcgccctcaggggtt
cagcggctgccctgggccgaactcatctgcccacaatttgtgcataaggagggcctcatg
gttggacatcagccaagtacgctgcccccagaactgccatctggacccccaccagggctc
cccagccctccgctccctgaagaggtgctgggcacccggagtcctggggatgggcacaac
gctcctgctgaaggcccagagggtgagtacgtagagctactggaggtgaccctgccgacg
aggggcagccccacagatgctgagggctcttcgggcctctccaggacccgaacagtgccc
acccgcaagagtgctggagggaagggccggcaccgcagacaccgggcatggatgcaccag
aagggccctggagcccgagaccaggacggcggagcacgcccgcctggcgaggggagcagc
accagagcctctcctgggtctcccccgggagccgaagccgtcccagaggccgcagtcctg
gaggcacctgagcccccggcagaggccctgggtgaagcctctgaggccacccctccgcgg
ccagctgaggctggaggagcaggccagggccctgaaggaccacccggtacccctcggaga
actggcaaaggaaacaggcggaagaagcgagctgcaggccgaggcgctcttaaccgagga
ggggacagtgcccctctcagccctggggacaaggaagaggccagccgccaggaagccctt
gccaatccaccctcaccaaatgaacaggagcttctagaatcctgcctggagaaggaggca
atcggaggctctggaaaactagactctgaactgaaggaggagctcacgcccacagatgag
aaggagcccccgccctcagaagactgtgtgcctacggaagagggggctggagagagagag
caggccgggtcgagcccagcaagtgctgcagacccagcggggatcccgtctgacccccca
acacaagccctggagacagagcaggaagtaaaggggggcagcgtcccagaagaggcccct
ccggtctccatctctgatggccctgatgtagcctgggacttgatggcgtctggattcctt
gtcctgactggaggggtggaccagagcgggcgcgctctgctgaccataacgccaccgtgc
ccttcccaggagcccccaccctcccaagaaacactgagctccacgctgcgttacctccac
tcactgctcaggcctgatctacaatcagtggggttgtctgtccttcttgaccttcgaaag
gcaccccctctgcctccagcactcattcctgccctgaatcaacttcaggactcaggagac
cctctcattcaacggctgctgattctcacccagggcgaccctccaagtgaactctgtgga
tttcagggcgctgagttgctgacacagaatgatctgaaaaaagtggccaagccagaggag
ctgcagtgggacttaggaggtcacagggccacctctcccagccactgggtggagatacat
caggaagtgacgaggctgtgccgcctgtgccggggtgtgctgagcgctgtacagcaggcc
actcaggagctggagggagccctggagctggaggcagaagaggccggcagcatgcctgac
cccctgcagaaggtgctggcagaccctcgcctgacggcgctgcagagggacgggggcgcc
atcctaatgaggctgcgctccacccacagcagcaagctggagggcccgggcccggccacg
ctgtatcaggcagtggacgaagccattcaccagctggtgcgcctctccaacctgcacgtg
cagcagcaggagcgaaggcagcgcctgcaccagctccagcaggtgttggactggctctcg
ggcccagcagaggagcagctggacagcttcgccttgcccggggactccctgtctgccctg
caggaggtggagctgcgattcagggctttcacagctgaggtgcagacacgcctggcccag
gcacgagaggccctggctctggaggagagcagtgcctcccagaaagttctggatatcttt
gagcaacggctggagcagattgagagcaacctccatcgggccctgaggctgcagcgcttc
ttccagcaggcaaacgagtgggtggacgagggctctgcgaggttggcaggcgcagggtca
ggtcgggaggccgtgctggcagccctcgccctgcggcgggccccggagcccagcgccggc
accttccaggagatgcgggccctggccctggacctgggcagcccagcagccctgcgggaa
tggggccgctgccgggcccgctgccaagagctggaaagaaggattcagcaacagctggga
gaggaggccagccctcgaggccagcggcggcgccgggcagacagtgccagcagtgcaggg
gcgcagcggggctcccacagcccctctcccagcctcggctccctgctgctccccagcagt
cctgggccacgtgcagccccatctcactgctccctggccccatgcggggaggactgcgag
gaggaaggccccgaacgggccacagaagcagatggcaggccccccaggcccgtgctaatc
cgaggcctggaggtcactagtaccgaggtggtagacagaacctgctcgccacgggaacat
gtgcttctgggccgggctggggggccagaagggccgtggggggtaggaaccccccggatg
gagcgcaagcgaagcatcagcgcccagcagcgtctcgtgtctgagctgattgcctgtgaa
caggagtatgtgaccaccctgagtgagcccgtgccaccccctgggcccgagctgaccccc
gagcttcggggcacctgggctgccatcctgagtgcccgggagagacttcgcagcttccac
cggacacactttttgcaggagcttcagggctgcgccgcccacccgctgcgcattggggcc
tgcttccttcgccacggagaccagttcagcctctacgcccagtacgtgaagcaccgacac
aaactggagaatggtctggctgcactcagcccaccagccaagggcttgttggagggtggc
ccctacctgccccgggccctgcagcagcctctggagcagctggctcggtatgggcggctc
ctggaggagctcttgcgggaagctgggccggagctgagttccgagcgccaggccctcggg
gctgctgtgcagctgctccgtgaacaagaggcccgtggccgagacctgctggccgtggag
gcggtgcgaggctgtgagatagacctgaaggaacagggacagctcttgcatcgggacccc
ttcactgtcatctgtggccggaagaagtgccttcgccatgtctttctcttcgagcacctc
cttctgttcagcaaactcaagggctccgagggggcctctgagaccttcgtttacaagcag
gcttttaagactgccgacatgggactgacagaaaacatcggggacagcggactgtgtttc
gaactgtggtttcggcggcgccgggcacgagaggcctatactctgcaggcaacctcgcca
gaggtcaagctcaaatggacaagttccatcgcccagctgctgtggagacaggcagcccac
aacaaggaactccgagtgcagcagatggtctccatgggcatcgggaataaaccattcctg
gacatcaaggcccttggggagcggacgctgagtgccctgctcactggaagagccgcccgc
acccgggcctccgtggccgtctcatcctttgagcatgccggcccctccctccccggcctc
tcaccgggagcctgctccctacctgcccgcgtcgaggaggaggcctgggatctggacgtc
aagcaaatttccctggccccagaaacacttgactcttctggagatgtgtccccaggacca
aggaacagccccagcctgcagaccacccaccctgggagcagcactcccaccctggccagt
ggagggatctttgggctatctaggcagactcatgcccgagccctgagcgaccccaccaca
ccgctgtga
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