Muscardinus avellanarius (hazel dormouse): 308271212
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Entry
308271212 CDS
T11987
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
mave
Muscardinus avellanarius (hazel dormouse)
Pathway
mave03050
Proteasome
mave05010
Alzheimer disease
mave05012
Parkinson disease
mave05014
Amyotrophic lateral sclerosis
mave05016
Huntington disease
mave05017
Spinocerebellar ataxia
mave05020
Prion disease
mave05022
Pathways of neurodegeneration - multiple diseases
mave05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
308271212 (PSMC6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
308271212 (PSMC6)
09164 Neurodegenerative disease
05010 Alzheimer disease
308271212 (PSMC6)
05012 Parkinson disease
308271212 (PSMC6)
05014 Amyotrophic lateral sclerosis
308271212 (PSMC6)
05016 Huntington disease
308271212 (PSMC6)
05017 Spinocerebellar ataxia
308271212 (PSMC6)
05020 Prion disease
308271212 (PSMC6)
05022 Pathways of neurodegeneration - multiple diseases
308271212 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mave03051
]
308271212 (PSMC6)
Proteasome [BR:
mave03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
308271212 (PSMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
AAA_22
RuvB_N
OB_PRS7
nSTAND3
AAA_14
Prot_ATP_ID_OB_N
DUF815
AAA_7
AAA_11
TIP49
RNA_helicase
AAA_33
AAA_3
NPHP3_N
AAA_18
Phage_scaffold
Mg_chelatase
TPR_MLP1_2
bpMoxR
DUF5906
AAA_lid_PRS2_C
AAA_28
Csa3_N
TsaE
Mua
CLIP1
AAA_24
NACHT
AAA_25
Vpar_1526
CEP131_C
AAA_17
Occludin_ELL
Parvo_NS1
MC5
IstB_IS21
ApoB100_4ins
Med4
Neur
Motif
Other DBs
NCBI-GeneID:
308271212
NCBI-ProteinID:
XP_080563536
LinkDB
All DBs
Position
12:58007943..>58030676
Genome browser
AA seq
389 aa
AA seq
DB search
MADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctagagataaagcgctccaggactaccgcaagaagctgctggagcacaag
gagatcgacggccgtcttaaagagttaagggagcaattaaaagaacttaccaagcagtat
gaaaagtctgaaaatgatctgaaggccctacaaagtgttgggcagattgtgggtgaagtg
cttaagcaattaactgaagaaaaattcattgttaaagctacaaatggaccaagatatgtt
gtgggttgtcgtcgacagcttgacaagagtaagctgaagccaggaacaagagttgctttg
gacatgacaacactaaccatcatgagatatttgccaagagaggtggatccactggtttac
aatatgtctcatgaagaccctggaaatgtttcttattctgagattggagggctatcagaa
cagattcgggaattgagagaggtaatagaattacctcttacaaacccagagttattccag
cgtgtaggaataatacctccaaaaggctgtttattatatggaccaccaggcacaggaaaa
acactcttggcacgagctgttgctagccagctggactgcaatttcttgaaggttgtatct
agttctattgtagacaagtacattggcgaaagtgctcgattgattagagaaatgtttaat
tatgccagggaccatcagccatgcatcatttttatggatgaaatcgatgcaattggtggt
cgtcggttttctgaaggtacttcagctgacagagaaattcagaggactttgatggagtta
ctgaatcagatggatggatttgatactctgcatagagttaaaatgatcatggctacaaac
agaccagatactctggatccagctttgctacgtccaggaagactagacaggaaaatacat
atcgatttaccaaatgaacaagcaaggttagatatattgaaaatccatgcaggtcccatt
acaaagcatggtgaaatagattatgaagcaattgtgaagctttcagatggctttaatgga
gcagacctgagaaatgtttgtactgaagcaggtatgtttgcaattcgtgctgatcatgat
tttgtagttcaggaagactttatgaaagcagtaagaaaagtggctgattctaagaagcta
gagtctaaattggactacaaacctgtgtaa
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integrated database retrieval system
