Muscardinus avellanarius (hazel dormouse): 308273698
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Entry
308273698 CDS
T11987
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
308273698 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mave03036
]
308273698 (TRIP13)
Chromosome and associated proteins [BR:
mave03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
308273698 (TRIP13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_18
Viral_helicase1
AAA_14
AAA_25
AAA_33
AAA_5
AAA_28
NPHP3_N
TsaE
IstB_IS21
ATPase_2
RuvB_N
RNA_helicase
Cytidylate_kin
AAA_17
DUF815
ABC_tran
NACHT
AAA_7
AAA_11
AAA_RNF213_4
AAA_30
AAA_24
TIP49
bpMoxR
Mg_chelatase
ATPase
PduV-EutP
Rad17
AAA_19
PhoH
nSTAND1
nSTAND6
NB-ARC
SLFN-g3_helicase
Sigma54_activat
AAA_3
Motif
Other DBs
NCBI-GeneID:
308273698
NCBI-ProteinID:
XP_080567085
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All DBs
Position
1:<490010..>507139
Genome browser
AA seq
430 aa
AA seq
DB search
MDQAAGELKQALPCVAEAPAVHVEVLQRGGSTAKKEDIKTSVWKLLNRHNIVFGDYMWTE
FDEPFLTRNVQSVSIVDTELKVKDSQPIDLSACSVALHIFQLNEDGPSSENLEEETENII
AASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTMLFSDKNVDSNLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQKIQDLI
DDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITEKIDVAFVDRADIKQYIGPPSAAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPTVTLEGFLQALSLAVDK
QFEEKKKLSV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggcggcgggcgagctgaagcaggcgctgccctgcgtggccgaggcgcccgcc
gtgcacgtggaggtgctgcagcgcggcggcagcacggcaaaaaaagaagatataaaaaca
agtgtttggaagctgctcaacaggcacaatattgtgtttggtgactacatgtggactgag
tttgatgaaccttttctgacaagaaatgtgcagtctgtgtctattgttgacacagagtta
aaggtcaaagactctcagcccatcgacttgagtgcttgctccgtggcactgcacatcttc
cagctgaatgaagatggccccagcagtgagaacctggaggaggagacagaaaacatcatt
gcagcaagtcactgggtgctgccggcagctgagttccatggactgtgggacagcctagtg
tacgatgtggaagtcaaatcacatctccttgattacgtgatgaccaccatgctgttctcc
gacaagaatgtcgacagtaacctcatcacctggaaccgagtggtgctgctgcacggtcct
ccaggaactgggaaaacatccctgtgtaaagccctagcccagaaactgaccatcagattg
tcaagcaggtaccgatatggccagttaattgaaataaacagccatagcctcttttctaag
tggttttcagaaagtggcaagctggtcacgaggatgttccagaagattcaagacttgatt
gatgataaggaagctctggtgttcgtgttgatcgatgaggtggagagcctcacggctgct
cgcaatgcttgcagggctggtgctgagccatcagatgctatccgcgtggtcaatgctgtc
ttgacccagatcgaccagattaaaaggcattccaatgtggtgattctgaccacttccaac
atcactgagaagatcgacgtggccttcgtggacagggctgacatcaagcagtacatcggg
ccgccctccgcagcagccatcttcagaatctacctttcttgtttggaggaattgatgaag
tgccagatcatataccctcgccagcagctgctgaccctccgagagctggagatgatcggc
ttcattgaaaacaacgtgtcaaagttgagccttcttttgagtgaaatttcaaggaagagc
gagggcctcagtggccgggtcctaaggaaactcccctttctggctcatgctctgtacatc
caggcccccaccgtcacccttgagggcttcctccaggccctctctctggcagtggacaag
cagtttgaggagaagaagaaactctcggtgtag
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