Muscardinus avellanarius (hazel dormouse): 308273890
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Entry
308273890 CDS
T11987
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04517
IgSF CAM signaling
mave04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308273890 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
308273890 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mave04812
]
308273890 (SPTBN1)
Cytoskeleton proteins [BR:
mave04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
308273890 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
308273890 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
308273890
NCBI-ProteinID:
XP_080567410
LinkDB
All DBs
Position
15:<49301173..>49448746
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRIAARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLSI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMITEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDSLHEQANALPQEHSESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAHQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEVHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSLNAE
AIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPP
SPEPSTKVSEETESQQQWDTSKGEQVSQNGLPAEQGSPRMAGTADTSEMVNGAAEQRTSS
KESSPIPSPTSDRKAKTALPAQSAATLPARTQEVPSAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEALCEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDMSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacaacagtacagtgat
gttaacaaccgctgggacgtggatgactgggacaatgaaaacagctctgcacggctcttt
gagaggtctcgcatcaaggctctggcagatgagcgtgaagccgtgcagaagaagaccttc
accaaatgggtcaactcccaccttgctcgagtgtcctgccggatcacagacctgtacacg
gaccttcgagatggacggatgctcatcaagctgctggaggtcctctctggggagagactg
ccaaaacccaccaagggacgaatgcgtatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccatgacattgtggac
ggaaaccaccggctgaccctcggcctcatctggaccatcattttgcgcttccagattcag
gacatcagtgtggaaactgaagataacaaagagaagaagtctgccaaggatgcactgctg
ttgtggtgccagatgaagacagctgggtaccccaatgtcaacattcacaattttaccaca
agctggagggacggcatggccttcaatgccctgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatccaatgcacactacaatctacagaatgcttttaaccta
gcagagcaacaccttggcctcactaaactattggaccccgaagatatcagcgtggaccac
cctgatgagaagtctattatcacttacgtggtgacttattaccactacttctctaagatg
aaggccttggctgttgaaggaaagcggattggaaaggtacttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgacctgctggagtggattgaacaa
accatcattattttaaataatcgcaaatttgccaattcactggttggagttcaacagcag
cttcaagcattcaatacttaccgcactgtggaaaaaccacccaaatttactgagaagggg
aacttggaagtgctgcttttcactattcagagcaagatgagggccaacaatcagaaagtc
tacatgccccgagaggggaagctcatctctgatataaacaaggcctgggaaagactggaa
aaagcagaacacgagagagaactggctctgcggaatgagctcataagacaggagaaactg
gaacagctcgcccgcagatttgatcgcaaggcagccatgagagagacttggttgagcgaa
aaccagcgtcttgtgtctcaggacaactttggatttgaccttcctgcagttgaggccgcc
acaaaaaagcacgaggccattgagacagacattgccgcatacgaggagcgtgtgcaggct
gtcgtggctgtggccagggagcttgaggcagagaactaccatgacatcaagcgcatcgca
gcaaggaaagacaatgtcatccgtctctgggaatacctgctggaactgcttagggcccgg
cggcagcgtcttgagatgaacctagggctacagaagatattccaggaaatgctctccatt
atggactggatggatgagatgaaggtgctattactgtctcaagactatggtaaacacttg
ttgggcgtggaagatctgttacagaaacatgccctggttgaagcagacattggaattcag
gcagagcgtgtgagaggtgtcaatgcttctgcccagaaatttgccacagacggggaaggc
tacaagccctgtgatccccaggtgatccgagaccgcgtggcccacatggagttctgctat
caagaactttgccagctggcagccgagcgccgggcacgccttgaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggaaggctggatacgggaaaaggagaagatt
ctgtcctctgatgattatggcaaagacctgaccagtgtcatgcgcctgctcagcaagcac
cgggcatttgaggatgagatgagtggccgcagtggtcactttgagcaggccatcaaggaa
ggcgaagacatgatcacagaggaacactttggatcagaaaagatccgtgagaggatcatt
tacatccgggagcagtgggccaacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcctccctgctgcaccagttccaggcggatgccgacgacattgacgcctggatg
ctagacatcctcaagattgtctccagcagcgatgtgggccacgacgagtactccacacag
tctctggtcaaaaaacacaaggatgtggcggaagagatcaccaactataggccgaccatt
gactcactgcacgaacaggccaatgccctcccccaggagcactcagagtctccagatgtg
aggggcaggctagcgggcatcgaggagcggtacaaggaggtggctgagctgacgcggctg
aggaagcaagcattgcaagacaccctggctctgtataagatgttcagcgaagctgacgcc
tgtgagctctggattgatgagaaggagcagtggctcaacaacatgcagatcccagagaaa
ctggaggacctggaagtcatccagcacagatttgagagcctggaaccagaaatgaacaac
caggcgtccagggttgcagtggtgaaccagattgcacgccagctgatgcacagtggccac
cccagtgagaaggaaatcaaagcccagcaggacaagctcaacacgaggtggagtcagttc
agagaactagttgataggaagaaggatgctcttctgtctgccctgagcatccagaactac
caccttgagtgcaatgaaactaaatcctggattcgagaaaagaccaaagttatcgagtcc
actcaagacctgggcaatgacctggctggcgtcatggccctgcagcgcaagctgactggc
atggagcgagacttagtggccatcgaggcaaagctgagtgacctgcagaaggaggcagag
aagctagagtctgagcaccctgaccaggctcaggccatcctgtctcggctggctgagatc
agtgacgtgtgggaagagatgaagaccaccctgaagaaccgagaggcctccctgggagag
gccagcaagttgcagcagttcctgcgggacttggacgacttccaatcctggctctccagg
acacagacggccatcgcctcagaggacatgccaaatactctgaccgaggcagaaaagcta
ctcacacagcacgaaaacatcaagaatgagattgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggacagaccgatgcccagtacatgtttctg
cggcagcggctgcaggctctggacaccggatggaatgagctgcacaaaatgtgggagaac
aggcagaacctcctctcacagtcccatgcccaccagcagttccttagggacacgaagcaa
gccgaggcctttctcaacaaccaggaatacgttttggctcatactgaaatgcccaccacg
ctggaaggagccgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagacgggccggaggctggtgagcgatggcaat
atcaactcggatcgcatccaggaaaaggtggactctattgatgacagacataggaagaat
cgtgaggcagccagtgaacttctgatgagattgaaagacaacagggaccttcagaaattc
ctgcaagattgtcaagagctatctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttatgatgaagccagaaatctgcacagtaaatggttaaaacaccaagcattcatg
gcagaacttggatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atatcagaaaagcccgagacagaagctgtggtgaaggagaaactcactggtttacataag
atgtgggaagtccttgaatccaccacccagaccaaggcgcagcggctctttgatgcaaac
aaggctgaacttttcacccagagctgtgcagatctcgacaaatggctgcatggcctggag
agtcaaattcaatctgatgactacggcaaagaccttaccagtgtcaatatccttctgaaa
aagcaacagatgctggagaatcagatggaggtgcggaagaaggagattgaggagctccag
agccaggctcaggctctgagtcaggaggggaagagcactgacgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggagctgctggagcccttgaacgaaaggaagcataac
ctgctggcctccaaggaggtccatcagttcaaccgggatgtggaggatgagattttatgg
gttggcgagagaatgcctttggcaacttccaccgatcatggccacaacctccagactgtg
cagctactaataaagaaaaaccagaccctccagaaagaaatacaggggcaccagcctcga
atcgacgacatctttgagaggagccaaaacatcgtcaccgacagcagccttaacgccgag
gccatcagacagaggctcgcagatctgaagcagctgtggggactcctcattgaggaaacg
gagaaacgccacaggcggctcgaggaagcacacaaggcccagcagtactattttgatgca
gctgaggccgaggcatggatgagtgagcaggaactctacatgatgtctgaggagaaggcc
aaggatgagcagagtgccgtctccatgttgaagaagcaccaaattttggagcaagccgtg
gaggactatgcagagactgtgcaccagctctccaagaccagtcgggctctggtggccgac
agccaccctgaaagtgagcgcattagcatgcggcagtccaaagtggataagctgtatgct
ggcctgaaggatcttgcagaagagaggagaggcaagctggatgagaggcacaggttattc
cagctcaaccgggaggtggacgacctggagcagtggattgctgagagggaggtggttgca
gggtcccacgaactggggcaggactatgagcatgtcacgatgttacaagaacgattccgg
gaatttgctagagacacagggaacattgggcaggagcgcgtggatacggtcaatcacatg
gcagatgacctcatcaactctggccattcagatgccgccaccatcgctgagtggaaggac
ggccttaatgaagcctgggctgacctcctagagctcattgacacaagaacacagattctt
gctgcttcctatgaactgcataaattttaccatgatgctaaggagatctttgggcgcatt
caggacaaacataagaaactccctgaggagcttgggagagatcagaacactgtggagacc
ttacagagaatgcacaccacctttgagcatgacatccaggctctgggcactcaggtgagg
cagctacaggaggatgcagcccgcctccaggcagcctatgcaggggacaaggccgacgac
atccagaagcgcgagaacgaggtcttagaggcttggaagtctctgctggatgcctgcgag
ggccgcagggtgcggctggtagacacaggagacaagttccgcttcttcagcatggtgcgt
gacctcatgctctggatggaggatgtcattcggcagatcgaagcccaggagaagccaagg
gatgtgtcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaattgat
gctcgcaatgacagtttcacaacctgcattgaacttggaaagtccttgcttgcgagaaaa
cactacgcatctgaagagatcaaggaaaagttactacagttgacagaaaagagaaaagaa
atgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccatcag
ttctcaagggatgccagcgtggccgaggcctggctgctgggacaggagccatacctatcc
agccgcgaaatcggccagagcgtggacgaggtggagaagctcatcaagcgccatgaagca
tttgagaagtctgcagcaacctgggatgagagattctctgccctggaaaggctgaccaca
ttggagttactggaagtgcgcagacagcaagaggaagaggaaaggaagaggcggccgcct
tctccggagccaagcacgaaggtttcagaggagaccgagtcccagcagcagtgggatacc
tcaaaaggagagcaagtttcccagaacggcttgccggctgaacagggatctccacggatg
gcaggtacagcggacacaagtgaaatggtcaatggcgctgcagaacagaggacgagctca
aaagagtccagcccgatcccctcccctacctctgatcgcaaagccaagactgccctgccc
gctcagagtgctgccaccctgccagcccggacccaggaggtgccttcagcccagatggaa
ggcttcctgaaccggaagcacgagtgggaggcccacaacaagaaagcctcgagcaggtcc
tggcacaatgtttattgtgtcataaataatcaagaaatgggtttctataaagatgcaaag
acagctgcttccggaatcccctaccacagtgaggtccctgtgagtttgaaagaagccctc
tgcgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctgaggctaaatgat
ggcaatgagtacctcttccaagccaaagacgatgaggagatgaacacatggatccaggcc
atctcttctgccatctcttctgataaacatgacatgtccgccagcacccagagcacgcca
gcatccagccgggcacagaccttacccaccagcgtcgtcaccatcaccagcgagtccagt
cccggcaagcgggagaaggacaaagagaaagacaaagagaagcgcttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
