Muscardinus avellanarius (hazel dormouse): 308275258
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Entry
308275258 CDS
T11987
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mave
Muscardinus avellanarius (hazel dormouse)
Pathway
mave04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
308275258 (MED13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mave03021
]
308275258 (MED13)
Transcription machinery [BR:
mave03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
308275258 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
308275258
NCBI-ProteinID:
XP_080569529
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All DBs
Position
16:complement(<35451964..>35558025)
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AA seq
2168 aa
AA seq
DB search
MSSSFVQNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGEDPSFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHITLAQQSNTPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCCLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSTSCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFNSDST
SHHGGKIPRKLASHVVDRVWQECNMNRAQNKRKYSASSGGLCEEETANKVACWDFVEVTQ
RTNCSCLRHKNLKPRNAGQGQAPALGQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRISI
SDDVGMDTDSASQRLVISASDSQVRFSNIRTNDVAKTPQMHGTEMANSPQPPPLSPHPCD
VVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPPQFQEAVEPTVYVGT
AVNLEEDEANIAWKYYKVPKKKDVEFLPPQLPSDKFKDDPVGPFGQESVTSVTELMVQCK
KRLKVSDELVQQYQIKNQYLSAIASDAEQEPKIDPYAFVEGDEEFLFPDKKDRQNNEREA
GKKHKVEDGTSSVTVLSHEEDAMSLFNPSVKQDVPRPTSHARPPSTSLIYDSDLAVSYTD
LDNLFNSDEDELTPGSKKSANGSDDKASCKESKTGNLDPLSCISTADLHKMYPTPPSLEQ
HIMGFSPMNMNNKEYGSMDTTPGGTVLEGNSSSIGAQFKIEVDEGFCSPKPSEIKDFSYV
YKPENCQVLVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLELLSSGSAMPFIKE
GDGSNMDQDYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTPR
GAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVM
NLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEVQYRCTCGFSAVMNRKFGNNSGLFL
EDELDIIGRNTDCGKEAEKRFEALRATSAEHVNAGLKESEKLPDELILLLQDQCTNLFSP
FGAADQDPFPKIGVISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSSCLH
PWAKRNDASMQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSY
GTDESPEPLPIPTFLLGCDYDFLVLSPFALPYWELLMLEPYGSQRDIAYVVLCPENEALL
NGAKSFFRDLTAIYESCRLGQHRPISRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGN
SEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPSNQSLIPPPQMTNTGNTNTP
SATLASAANSTMTVTSGVGISTSVTNSTLTTTSSSSSSSLSSGVSTNKLPSFPPFGSMNS
SGTGSMSTQASAVQSSQLGGQQPSALQTAGISGEASSLPTQPHPDVSESTMDRDKVGIPT
DGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVS
VQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMET
ALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILAS
CTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLG
RIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIM
PDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFN
PNNDGADGMGIFDLLDTGDDLDPDIINILPASPTASPVHSPGSHYPHGGDAGKGQGTDRL
LSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPS
VQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVLNQL
YNFIMNML
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctccttcgtgcagaacggggccagcctggaggactgtcactgcaacctcttc
tgcctggctgacttgacaggaattaaatggaaaagatatgtatggcaaggtccaacttct
gcccctattctgtttcctgtgactgaagaagaccctattttgagcagttttagtcgctgc
cttaaggcagatgtacttggtgtttggcgacgagatcaaagacctggaagaagagagttg
tggatattttggtggggtgaagacccaagttttgccgatctcattcaccatgacttatca
gaagaggaagatggagtgtgggagaatggactttcctatgaatgccgtactttgcttttt
aaagcagttcacaatctcttggagcggtgtttaatgaaccgtaactttgtgcgcattggc
aagtggtttgtaaagccttatgaaaaagatgagaaacctataaataaaagtgaacacttg
tcctgctccttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcagcctgtataccttctcagtgaagagcatatcacccttgcacaacagtct
aacaccccatttcaagttatcttaagcccatttggactaaatggcactctcacaggacag
gcattcaagatgtctgattcagctacaaaaaaattgattggtgaatggaaacaattctat
cctatctcatgttgcttgaaggagatgtctgaagaaaaacaggaagatatggattgggaa
gatgattctttagctgccgtagaagttcttgttgctggtgtccgaatgatctacccagca
tgctttgttctagtccctcagtcagacattcctactcctagttctgtgggttcctctcac
tgttcaacttcttgcttgggtgtccaccaagtgcctgcttctacaagagatcctgctatg
tcttcggttactcttacaccacctacatctcctgaggaagtccaaacagttgatcctcag
tctgcccagaagtgggtcaaattttcttcagtgtctgatggcttcaactctgatagtact
agccaccatggtgggaaaatacccagaaaactagcaagtcatgtggtggatagagtttgg
caagagtgcaatatgaacagagcacagaacaagaggaagtattctgcttcatcaggtggc
ctatgtgaagaagaaacagctaacaaagtagcatgctgggactttgtcgaagtcacacaa
agaacaaattgcagttgtttgaggcacaaaaatctcaaaccaagaaatgctggacaagga
caggcaccagctttaggtcagcaacaagtacttcctaagcacaagaccaatgagaagcaa
gaaaagagtgaaaagccacagaaacgccctctgactccttttcaccatcgtatatctatt
agtgatgatgttggcatggacacagattcagccagccaaagacttgtgatctctgcctca
gacagtcaagtgagattttcaaacatccgaactaatgatgtagcaaagactcctcagatg
catggcaccgaaatggcaaattcacctcaaccacccccacttagtcctcacccatgtgat
gtggttgatgaaggagtgactaaaacaccttcaactcctcagagccagcatttttatcaa
atgccaacaccggatcccctggttcctactaaaccaatggaagataggatagacagtttg
tcccagtctttcccacctcaattccaggaagctgtagaacctacagtatatgttggtaca
gctgtaaacttggaagaagatgaagcaaacatagcctggaagtattacaaggtcccaaag
aaaaaagatgttgaatttttaccacctcaacttccaagcgataaattcaaggatgatcca
gttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcagtgcaag
aaacgattaaaagtttctgatgaattagtgcagcaatatcaaattaaaaatcagtatctt
tcagcaatagcatctgatgcagaacaagagcctaaaattgatccttatgcatttgttgaa
ggagacgaggaatttctttttcctgataaaaaagataggcaaaacaatgaaagagaagct
gggaaaaaacacaaggtagaagatgggacgtctagtgttacagttttatcacatgaagaa
gatgctatgtcattatttaatccctctgtcaagcaagatgttccacgccctactagtcat
gcccgtcctccatcaaccagtttgatttatgactcagacctggctgtctcttatactgac
cttgataatctcttcaattctgatgaagatgaattaacacctggatctaaaaaatcagcg
aatggatcagacgataaagccagctgcaaagaatcaaagacaggaaatctggatccatta
tcttgcataagcactgcagatcttcataagatgtatcctacaccaccatcattggaacaa
catattatgggattttccccaatgaatatgaataataaagaatatggtagtatggataca
acacctggaggaactgttctagaaggaaatagttctagtataggagcacagttcaaaatt
gaggttgatgagggattctgtagccccaaaccttctgaaattaaagatttttcttatgtc
tataagcctgaaaattgtcaagttctagtgggatgttccatgtttgcacctctaaaaact
ctaccaagccaatgtctaccccccatcaaattgccagaagagtgtatttaccgtcagagt
tggactgttggaaaattagaattgctttcttcagggtctgcaatgccattcatcaaagag
ggtgatggaagtaatatggatcaagattatggcccagcttatacacctcagacccatact
tcttttggaatgcctcccagcagcgcacctcctagtaacagtggagcaggaattcttcct
tctccatccacccctaggtttccaactccaagaactccaaggactcctcggactcctcgt
ggagctggtgggcctgctagtgctcaaggttcagtcaaatatgaaaattcagacttatat
tcaccagcttccaccccatccacatgcagaccccttaattctgttgaacctgccactgtt
ccctccatccctgaagcacacagtctttatgtaaacctcatcctttcagaatcagttatg
aatttgtttaaggactgtaactttgatagttgctgtatatgtgtctgcaacatgaacatc
aaaggtgcagatgttggagtttacattccagatccaacgcaggaagttcagtataggtgt
acctgcgggttcagtgctgtcatgaacagaaaatttggaaacaattcaggattatttctt
gaagatgaactagatatcataggacgcaacacagactgtggcaaagaagcagaaaaacgt
tttgaagctctcagggctacctctgccgaacatgttaatgccggtctaaaggaatctgaa
aaattgcctgatgagttaatattattgctacaagatcagtgcactaatttattttcaccc
tttggagcggcagaccaagatcctttccccaaaattggtgtaattagcaattgggttcgt
gttgaagaacgggactgttgcaatgactgctaccttgcattggaacatgggcgtcaattt
atggataatatgtcaggaggaaaagttgatgaagcacttgtgaaaagttcatgcttacat
ccttgggccaaaagaaatgatgccagtatgcagtgctcacaggatatacttcgaatgctc
ctctcacttcagccagttcttcaagatgctattcagaaaaaaagaacagtcagaccatgg
ggggttcaaggtcctctcacgtggcaacaatttcataaaatggctggccgaggctcttat
ggaactgacgaatctccggaaccactgccaatccccacgtttttgttgggttgtgattat
gattttctggtgctttctccatttgctctcccttactgggagctacttatgctggaaccc
tatggatctcaaagagatatagcttatgttgtattatgtccagagaatgaagctttgtta
aatggagccaaaagcttttttagagatcttactgcaatatatgagtcctgtcgactaggt
cagcatagacctatttctcgactattgactgatgggatcatgagagttggatctactgca
tcaaagaaattatcagaaaagttggtagccgaatggttttctcaggcagctgatggtaac
agtgaagcattttctaaactcaagctttatgcacaagtctgcagatatgacctaggtcct
tatcttgcttcccagccactggacagctctctgctttcccagccaaatttagttgcccct
tcaaaccagtctttgattcctccgcctcagatgacaaatactggaaacactaatactcca
tctgctactctggcatctgcagcaaacagcactatgacagtgacttcaggtgttggcata
tctacttcagttaccaattcaactttgaccacaacttcatcttcatcctcctccagtttg
agtagtggagtatcaacaaataaattaccttcatttccaccctttggcagtatgaacagt
agtggtacaggatccatgtctacacaagcaagtgcagttcagagtagccagctaggaggg
cagcagccatcagctctgcagacagctgggatttctggagaggcatcttcactaccaact
cagccacatcctgatgtgtctgaaagcacaatggatcgggataaagtgggaattcccaca
gatggtgattcgcatgcaattacatatccacctgcaattgttgtttatataattgatcct
tttacatatgaaaataaagatgaaagcactaactcttctaatgtatggactttggggcta
cttcgatgttttctggaaatggtccagactcttcctcctcatattaagagtactgtttct
gtacagattgttccttgtcagtacctgttacaacctgtgaagcatgaagatagacaaatc
tatacccagcatttaaaatctctggcgttttcggcctttactcagtgtcgaagaccactt
ccaacatcaaccaatgtgaaaacattgactggctttggtccaggtttagccatggaaact
gctcttaaaagtcctgatagacccgagtgtattcgactttatacacccccttttattctg
gctccagtgaaggacaaacaaacagaactaggagaaacatttggagaagctggacagaaa
tataatgttctttttgttggttactgtttatcacatgatcaaaggtggattcttgcatct
tgcacagatctatatggagaacttttagaaacttgtatcattaacatcgatgttccaaat
agggctcgtcggaaaaaaggttctgctagaagatttggtctacagaaactttgggagtgg
tgcttaggacttgtacaaatgagttcattaccatggagagttgtaattggtcgtttggga
aggataggtcatggagaattgaaagattggagctgtttactgagtcgtcgaaatttgcaa
tctctaagtaaaaggctcaaagacatgtgtaggatgtgtggtatatctgctgcagactct
cccagtattctcagtgcttgcttggtagcaatggaacctcaaggctcttttgttattatg
ccagattctgtttcaactggttctgtatttggaagaagcaccactctaaatatgcagaca
tctcagctgaataccccacaggatacatcatgtacgcatatacttgtattccctacttct
gcttctgtacaagtagcttcagctacttacaccactgaaaatttggatttagctttcaat
cccaacaatgatggagcagatggaatgggtatctttgatttattagacacaggagatgat
cttgatcctgatattattaatatccttcctgcatctccaactgcgtctcctgtgcattct
ccaggatctcattacccccatggaggtgatgctggcaagggtcagggtactgatcggcta
ctttcaacagaatctcatgatgaagtaactaatattcttcagcaaccattggcccttggg
tacttcgtatcaactgccaaagcgggtccattacctgactggttctggtcagcatgtcct
caagcacaatatcagtgtcccctttttcttaaggcctctttgcacctccacgtgccttca
gtgcaatctgatgagctgcttcacagtaaacactcccacccacttgactcaaatcagact
tcagacgtcctcaggtttgttttggaacagtacaatgcactctcctggctaacctgtgac
cctgcaatccaggacagacgctcatgtctcccaattcattttgtggtgctgaatcagtta
tataactttatcatgaatatgctgtga
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