Muscardinus avellanarius (hazel dormouse): 308275277
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Entry
308275277 CDS
T11987
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
308275277 (SOX9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mave03000
]
308275277 (SOX9)
Transcription factors [BR:
mave03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308275277 (SOX9)
SSDB
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Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
308275277
NCBI-ProteinID:
XP_080569552
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All DBs
Position
16:<65793001..>65795952
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AA seq
506 aa
AA seq
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MNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGDPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPP
NGHPGVPATHGQVTYSGSYGISSTAATSAGAGHVWMSKQQAPPPPPQAPPAPQAPPQQQP
PPAPPQQQAAPPQQQQAHTLTTLTSEPGQSQRTHIKTEQLSPSHYSEQPHSPQQIAYSPF
NLPHYSPSYPPITRSQYDYTDHQNSGSYYSHAGGQGSGLYPTFTYMNPAQRPMYTPIADT
SGVPTIPQTHSPQHWEQPVYTQLTRP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtccggc
gcccccagccccaccatgtccgaggactcggcgggctcgccctgcccctcgggctcgggc
tccgacaccgagaacacgcggccccaggagaacacgttccccaaaggcgacccggacctc
aagaaggagagcgaggaggacaagttccccgtgtgcatccgcgaggcggtcagccaggtg
ctcaagggctacgactggaccctggtgcccatgcccgtgcgcgtcaacggctccagcaag
aacaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggcggcgcgc
aggaagctggccgaccagtacccgcacctgcacaacgccgagctcagcaagaccctgggc
aagctctggagactgctcaacgagagcgagaagcggcccttcgtggaggaggccgagcgg
ctgcgcgtgcagcacaagaaggaccaccccgactacaagtaccagcctcggcgcaggaag
tcggtgaagaacgggcaggcggaggccgaggaggccacggagcagacgcacatctccccc
aacgccatcttcaaggcgctgcaggccgactcgccccactcctcctccggcatgagcgag
gtgcactcccccggcgaacactcggggcaatcgcagggcccgcccaccccacccaccacc
cctaaaaccgacgtgcagccgggcaaggcggacctgaagagagaggggcgccccctgccc
gaggggggcagacagccccccatcgacttccgcgacgtggacatcggcgagctgagcagc
gacgtcatctccaacatcgagaccttcgacgtcaacgagtttgaccagtacctgccgccc
aatggccaccccggggtgccagccacgcacggccaggtcacctactccggcagctacggc
atcagcagcaccgcggccacctcggcgggcgcgggccacgtgtggatgtccaagcagcag
gcgccgccgcccccgccgcaggcccccccagccccgcaggcgcccccgcagcagcagccg
ccgcccgcgcccccgcagcagcaggcagcgcccccacagcagcagcaggcgcacacgctg
accacgctgaccagcgagcccgggcagtcccagcgaacgcacatcaagaccgagcagctg
agccccagccactacagcgagcagccgcactcgccccagcagatcgcctacagccccttc
aacctgccgcactacagcccctcctacccgcccatcacccgctcgcagtacgactacacc
gaccaccagaactcgggctcctactacagccacgcggggggccagggctctggcctctac
cccaccttcacctacatgaaccccgcccagcgccccatgtacacccccatcgccgacacg
tccggggtccccaccatcccgcagacccacagcccccagcactgggaacaacccgtctac
acacagctcaccagaccttga
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