Muscardinus avellanarius (hazel dormouse): 308277481
Help
Entry
308277481 CDS
T11987
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
mave Muscardinus avellanarius (hazel dormouse)
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mave03000
]
308277481 (SOX18)
Transcription factors [BR:
mave03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308277481 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
308277481
NCBI-ProteinID:
XP_080572795
LinkDB
All DBs
Position
19:<20716843..>20718176
Genome browser
AA seq
335 aa
AA seq
DB search
MQRSPPGYGAQDDPPARRDCAWAPRPAPAAEPRGLPAPSARSPPRPPSPPRSPARGRHGP
GPPAESRIRRPMNAFMVWARDERKRLAQQNPDLHNAVLSKMLGKAWKELGAADKRPFVEE
AERLRVQHLRDHPNYKYRPRRKKQARRARRLEPGPPRPAPFPALPGRELPALGAALDGLG
LPTPERSPPGGLEPGEPAFFPPPAAPEDCALRALRAPLAAELARDPGGFGALRTAPPAGL
YYGAYPSPLSPPPDAPPLDGPEPLGAADLWADVDLAEFDQYLNCGRTRADAAALPYHVAL
AKLGPRAMSCPEESSLISALADASSAVYYSACISG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgcccggctacggcgcacaggacgacccgcccgcccgccgcgactgt
gcatgggccccgcgccccgcgcccgccgctgagccgcgcggcctccccgcgccctccgcg
cgcagcccgccgcgcccgcccagcccgccgcgcagccccgcgcgggggcgccatggcccc
ggcccgcccgccgagtcgcgcatccggcggcccatgaacgccttcatggtgtgggcgcgc
gacgagcgcaagcggctggcgcagcagaaccccgacctgcacaacgcggtgctcagcaag
atgctaggcaaggcgtggaaggagctgggcgcggcggacaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacctgcgcgaccaccccaactacaagtaccggccgcgc
cgcaagaagcaggcgcgcagggcgcggaggctggagcccggcccgccgcgccccgcgccc
ttcccggccctgcccggccgcgagctgcccgcgctgggcgccgcgctggacggcctgggg
ctgcccacgcccgagcgctcgccgcccggcggcctggagcccggcgagcccgccttcttc
ccgccgcccgccgcgcccgaggactgcgcgctgcgggccctgcgcgcgcccctggcggcc
gagctggcgcgggaccccggcggcttcggggcgctccggaccgcgccgcccgccggcctc
tactacggcgcctaccccagcccgctgtcgccgccgcccgacgccccgccgctggacggc
cccgagccgctgggcgccgccgacctgtgggccgacgtggacctcgccgagttcgaccag
tacctcaactgcggccggactcgggccgacgcggccgcgcttccctaccacgtggcgctg
gccaagctgggcccccgcgccatgtcctgccccgaggagagcagcctcatctccgcgctg
gccgacgccagcagcgctgtctactacagcgcctgcatctcgggctag
DBGET
integrated database retrieval system
