Muscardinus avellanarius (hazel dormouse): 308277889
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Entry
308277889 CDS
T11987
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform 1
KO
K14411
RNA-binding protein Musashi
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308277889 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mave03019
]
308277889 (MSI1)
Messenger RNA biogenesis [BR:
mave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
308277889 (MSI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_11
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
308277889
NCBI-ProteinID:
XP_080573492
LinkDB
All DBs
Position
21:<14139287..>14165532
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AA seq
362 aa
AA seq
DB search
MDSDAPQPGPAAPDAPHDPCKMFVGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRS
RGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGST
PSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNG
YH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgcgccgcagcccggcccggccgccccggacgcgccgcacgacccctgc
aagatgttcgtcgggggactgagctggcagacgacgcaggaagggctgcgcgagtacttc
ggccagttcggggaggtgaaggagtgcctggtgatgcgggaccccctgaccaagcgatcc
aggggtttcggcttcgtcactttcgtggaccaggcgggggtggacaaggtcctggcgcag
tcgcggcacgagctcgactccaaaacgattgaccccaaggtggcctttcctcggagagca
cagcctaagatggtgactcgaactaagaagatctttgtgggggggctgtcggtgaacacc
acggtggaggacgtgaagcagtattttgaacagttcgggaaggttgatgatgccatgctg
atgtttgacaagaccaccaaccggcaccgagggttcggatttgtcacatttgaaagcgag
gacatcgtggaaaaagtgtgtgaaatccacttccatgaaatcaacaacaaaatggtggaa
tgtaagaaggctcagccaaaggaggtcatgtccccgaccggctcagcccggggcaggtcc
cgagtcatgccctacggaatggacgccttcatgctgggcatcggcatgctgggttaccca
ggtttccaagccacgacctacgccagccggagttatacaggcctcgctcccggctacacc
taccagttccctgaattccgtgtagagcggacccctctcccgagcgccccagtcctcccc
gagcttacagccattcctcttactgcttacggaccaatggcagcagcggcggcagcagca
gctgtggttcgagggacaggctctcacccttggacgatggctccccctccaggttcgact
cccagccgcacagggggcttcctggggaccaccagccctggccccatggctgagctctac
ggggcagccaaccaggactcgggggtcagcagttacatcagcgccgccagccctgccccc
agcaccggcttcggccacagtcttgggggccccttgatcgccacagccttcaccaatggg
taccactga
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