Muscardinus avellanarius (hazel dormouse): 308278228
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Entry
308278228 CDS
T11987
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave03030
DNA replication
mave03410
Base excision repair
mave03420
Nucleotide excision repair
mave03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308278228 (RFC5)
03410 Base excision repair
308278228 (RFC5)
03420 Nucleotide excision repair
308278228 (RFC5)
03430 Mismatch repair
308278228 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mave03032
]
308278228 (RFC5)
03036 Chromosome and associated proteins [BR:
mave03036
]
308278228 (RFC5)
03400 DNA repair and recombination proteins [BR:
mave03400
]
308278228 (RFC5)
DNA replication proteins [BR:
mave03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
308278228 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
308278228 (RFC5)
Chromosome and associated proteins [BR:
mave03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
308278228 (RFC5)
DNA repair and recombination proteins [BR:
mave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
308278228 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
308278228 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_assoc_2
AAA_11
AAA_22
AAA_lid_RFC1
AAA_16
RuvB_N
AAA_14
DEAD
nSTAND_NTPase5
DUF815
ResIII
AAA_5
TniB
ATPase_2
AAA_19
AAA_30
AAA_7
TIP49
PhoH
nSTAND3
DNAX_ATPase_lid
bpMoxR
Thioredoxin_6
AAA_28
Motif
Other DBs
NCBI-GeneID:
308278228
NCBI-ProteinID:
XP_080573980
LinkDB
All DBs
Position
21:<11925802..>11941397
Genome browser
AA seq
340 aa
AA seq
DB search
METSTMQQQQQPAAPKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYGDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVGKEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNLDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacctccacgatgcagcagcagcagcagcccgcggcgcccaagatcaggaacctg
ccctgggtggaaaagtaccggccgcagacgttgaatgacctcatctctcaccaggacatt
ctgagcaccattcagaagtttatcagtgaagaccgactgccccacctgcttctctatggc
cctccagggacaggaaagacatccaccatcctggcctgtgccaaacagctgtacggagat
aaagaattcggctccatggtcctggagctgaatgcgtcggacgacagagggatagatatc
gtgcggggacccatcctcagctttgccagcacaaggacgatatttaagaaagggtttaag
ctggtcatcttggacgaagcggatgccatgacccaggatgcccagaatgccttgcggcga
gtgattgagaaattcactgaaaataccagattttgcctcatctgtaactatctgtccaag
atcatccctgccctgcagtctcggtgcacgaggtttcgattcggtcccctgacacctgaa
ctcatggttccccgcctggaacacgttgtaggaaaagagaaggttgatataagcgaggac
gggatgaaggcgcttgtgacgctctccagcggggacatgcgaagggccttgaacatctta
cagagcaccaacatggccttcgggaaggtgacggaggagacagtgtacacctgcacgggg
cacccgctcaagtcagacatcgccaacatcctggactggatgctgaatctggacttcact
acggcttacaggaacatcatggagttgaaaactctgaaggggctggcgctccatgacatc
ctgacggagattcacttgttcgtgcacagagttgactttccgtcttcagtacgaatacat
ttgttgaccaaaatggcagacattgagtacagactttccgttggcaccagcgagaagatt
cagctgagttccctcatcgctgcttttcaagttactagagacctgattgtcgcagaggcc
taa
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integrated database retrieval system
