Muscardinus avellanarius (hazel dormouse): 308278261
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Entry
308278261 CDS
T11987
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform 1
KO
K23625
ataxin-2
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave05014
Amyotrophic lateral sclerosis
mave05017
Spinocerebellar ataxia
mave05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308278261 (ATXN2)
05017 Spinocerebellar ataxia
308278261 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
308278261 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mave03019
]
308278261 (ATXN2)
Messenger RNA biogenesis [BR:
mave03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
308278261 (ATXN2)
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GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
308278261
NCBI-ProteinID:
XP_080574056
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All DBs
Position
21:<153526..>232364
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AA seq
1131 aa
AA seq
DB search
MALKPQPPPPPQQPPPPAAGARKPGGGGLLPAPAAAAASSAAAPCPAAGAGGGRPGLGRG
RNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLD
AAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEH
KEKDLEPWDAGELTAAEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPL
ERDNSEEFLKREARAKQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRSGSERDGHGT
NSRENKYIPPGQRNREVLSWGSGRQNSPRMGQPGAGSLPSRSASHAPDFNPSSGSDQRVV
NGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPA
PVSTVPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAAPPVART
SPAGGTWSSVVSGVPRLSPKAHRPRSPRQNSVGHTPSGPVLGSPQAGTIPAEAVAMPVPA
ASPTPASPASNRAVTPSAEAKDSRLQDQRQNSPAGNKENIKQNETSPSFSKAENKGISPV
VSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLSKNREGEKSRDMIKDKMETGAKDSFIE
NSSSSCPSGGSKPGSPSLSPSILSGAEHKRGPEVTSQGVQTSSPACKQEKDEKEEKRDAA
EQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSLVGHQQPAPVYTQPVCFAP
NMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPPQRPDQHHQSSVLHPATATA
AGPPVVATPPAYSTQYVAYSPQQFPSQPLVQHVPHYQSQHPHVYSPVIQGSARMMAPPAH
AQPGLVSSSAAQYGAHEQTHTMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNANLHP
HTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTP
PAMTPASNTQSPQNSFPAAQQTVFALHPSHVQPAYTNPPHVAHVPQAHVQSGMVPSHPTA
HAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagccgcagccgccgccgccgccgcagcagccgccgcccccggccgccggc
gcccgcaagcccggcggaggaggcctgctcccggcgcccgccgcagccgccgcgtcctcg
gccgccgccccctgccccgcggcgggcgcgggcggcgggcggcccggcctgggcagaggt
cgaaacagcaaaggactgcctcagtctacgatttcttttgatggaatttatgcaaatatg
aggatggtccatatacttacatcagttgtcggatccaaatgtgaagtacaagtgaaaaac
ggaggtgtctacgaaggagtttttaaaacatatagtcctaagtgcgatttggtacttgat
gctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatggag
agtattttattcaagtgttcagactttgttgtggtacagtttaaagatatggactcgagt
tatgcaagaagagatgcttttactgactctgcgatcagtgctaaagtaaatggggagcac
aaggagaaggacctggagccctgggacgctggggagctcaccgccgccgaggagctggag
gctctggagaatgatgtatctaatggatgggatcccaatgatatgtttcgatataatgaa
gaaaattatggtgtagtatctacatatgatagcagtttgtcttcatatacggtaccctta
gaaagagataactctgaagagtttttaaaacgggaagcaagggcgaagcagctagcagaa
gaaattgaatcaagtgctcagtacaaagctcgagtggccctggagaatgatgataggagc
gaggaggaaaaatacacagcagttcagagaagcggcagtgagcgggatgggcacggcacc
aactcgagggaaaataaatatattcctcctggacaaagaaatagagaagtcctatcctgg
ggaagtgggagacagaactccccacgcatgggccagcccggagcgggctctctgccatca
agatctgcttctcacgctccagacttcaacccgagctctggttcagaccaaagagtagtt
aatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgc
taccagtcaggtcccaactctcttccacctcgggcagccacccccacacggccgccctcc
aggcccccctcgcggccctccaggcccccgtctcacccctctgctcatggttctccagct
cctgtctctactgtgcctaaacgcatgtcttcagaaggtcctccaaggatgtccccaaag
gcccagcgacaccctcgaaatcacagagtttctgctgggaggggttccatgtccagtggc
ctagaatttgtatcccacaacccaccaagtgaagccgctgctcctcccgtggcaaggacc
agtcctgcagggggaacctggtcatcagtggtcagtggggttccaagattatctccaaaa
gctcacagacccaggtctcccagacagaacagtgttggacatactcccagcgggcccgtg
cttggttctccccaggctggcaccattccagctgaagctgttgccatgccggtcccggct
gcgtctcctacgcccgctagccctgcttccaacagagcagtgactccctcagctgaggct
aaagattccaggcttcaagatcagaggcagaactctcctgcagggaataaagaaaatatt
aagcaaaatgaaacatcacctagcttctcaaaagctgaaaataaaggtatatcaccagtt
gtttctgaacatagaaaacagattgatgatttaaagaagtttaaaaatgattttaggtta
cagccaagttctacttctgaatctatggatcaactactaagtaaaaatagagagggagaa
aaatcaagagatatgatcaaagacaaaatggaaacaggcgctaaggattctttcattgaa
aacagtagcagcagctgccccagtggcggcagcaagcccggcagccccagcctctcccct
tccatacttagcggcgcagagcacaagagggggcccgaggtcacatcccagggggttcag
acatccagtccagcctgcaaacaagagaaagatgaaaaagaggaaaagagagatgcagct
gagcaagttaggaaatcaacactgaatcccaacgcaaaggagttcaatcctcgctccttt
tctcagccaaagccttctaccaccccaacttcgcctcggcctcaagcacagcccagccca
tctctggtgggccatcaacagccagctccagtttatacgcagcctgtttgttttgcacca
aatatgatgtatcctgttccagtgagccctggcgtgcagcctttgtacccaatacccatg
acgcccatgccagtgaatcaagccaagacatatagagcaggtaaagtaccaaatatgccc
ccgcagcggccagaccagcaccatcagagcagcgtgctgcaccccgccactgccaccgcc
gcgggcccgcccgtcgtggccacgcccccggcctactccacccagtacgtggcctacagc
ccgcagcagtttcccagtcagcccctggtgcagcacgtgccccactatcagtctcagcat
cctcacgtctatagtcctgtcatacaggggagtgccaggatgatggccccaccggcccac
gcgcagcctggcctggtgtcctcctcggcggcccagtacggggctcacgagcagacgcac
acgatgtatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctacttt
gccatttccacgggctcccttgctcagcagtatgcgcaccctaacgctaacctgcaccca
catactccacatcctcagccttcagccacccccaccggacagcagcagagccagcacggt
ggaagccaccccgcacccagtcctgtgcagcatcatcagcaccaggccgcccaagctctc
catctggccagcccacagcagcagtcagccatttaccacgcggggctcgcaccaacccca
cctgccatgacacctgcctccaacacgcagtcgccacagaatagcttcccagcagctcaa
cagactgtctttgccctccacccttctcacgtgcagccggcatacaccaacccaccccac
gtggcccacgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcc
catgcgccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgct
caaagtgcactacagcccattccagtctcgacaacagcgcatttcccctatatgacgcac
ccttcagtacaagcccaccaccaacagcagctgtaa
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