Muscardinus avellanarius (hazel dormouse): 308278610
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Entry
308278610 CDS
T11987
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave03013
Nucleocytoplasmic transport
mave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308278610 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
308278610 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mave03019
]
308278610 (THOC2)
03041 Spliceosome [BR:
mave03041
]
308278610 (THOC2)
Messenger RNA biogenesis [BR:
mave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308278610 (THOC2)
Spliceosome [BR:
mave03041
]
Complex C
Other components
EJC/TREX
308278610 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308278610 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
308278610
NCBI-ProteinID:
XP_080574620
LinkDB
All DBs
Position
X:<82081616..>82208910
Genome browser
AA seq
1562 aa
AA seq
DB search
MAAATVVVPAEWIKNWEKSGRGEFLHLCRILSENKNHDSSTYRDFQQALYELSYHVIKGN
LKHEYASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADSCIMDEHR
REIVEAKQIVRKLTMVVLSSEKMDEREKEKEKEEDKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVHALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVDKICQEEKEKRPDLYALAMGYSGQLKSRKSHMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSTSKSDESSTEETDKSRERSQCGVKAINKASSATPKGNSGNGNSGS
NSSKTVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKEEKFKTTVPNVESKSTQEREREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDNAEPERGKQKRRKIDTHPSPSHSSTVKDSLNELKESSTKLY
INHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDRELPPDLTKR
RKEENGTIGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKK
VN
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgactgtggtggttcccgcagagtggataaagaactgggagaaatctggg
agaggcgaatttttgcatttatgccggattctcagtgaaaataaaaatcatgatagttca
acttatagagactttcagcaagctctctatgaattgtcataccatgtcattaaaggaaat
ctaaagcatgaatacgcatccaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctctattcttgctgacgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtgttagcatgtttgtatttagtttcagac
acagttcttaaggaacgcctggatccagaaacactggaatcattagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaattttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtttttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaagtggc
gaaactccatcatcattatacagagttgcagcagtacttcttcaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgatagttgcattatggatgaacacaga
cgagaaattgtggaagctaagcaaattgttaggaaacttacgatggttgtgttgtcttct
gagaaaatggatgagcgagagaaagaaaaggaaaaagaagaggacaaggtagagaagcca
cctgacaaccaaaaacttggtttattggaagccttattaaagattggtgattggcagcac
gcacagaacattatggatcagatgcctccatactatgcagcttcacacaaactaatagcc
cttgctatttgcaagcttattcacataactattgagcctctctaccgaagagttggtgtt
cctaaaggtgctaaaggctcacctgttcatgctttgcaaaacaagagagcaccaaagcaa
gcagagagctttgaagatttgaggagagatgtattcaatatgttctgttaccttggtcct
cacctttctcatgatcctattttattcgcaaaagtagtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccctatcagcatagg
tatcgtctgtatggccagtggaagaatgaaacttataatagtcacccacttctagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaactaaggaaaat
gtgaagccttcgggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgacaatttaattacacctgtagtagattca
ttgaaatacctcacgtcattgaattatgatgtcctggcctattgtatcattgaagcatta
gctaatccagaaaaggagagaatgaaacatgatgatacaaccatctcaagctggcttcag
agtctggctagtttttgtggtgcggtttttcgtaaatatccaattgatcttgctggtctt
cttcagtatgtggccaatcaactaaaagcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggcatagaaattacagaggaaatgacaatggaacaacta
gaggccatgactggtggggagcagctaaaagcagagggtggttactttggccagatcaga
aacactaaaaagtcctctcagagattaaaggatgcattattggatcatgatcttgctctt
cctctctgtttactcatggctcaacagaggaatggcgtaatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaaactttatgaccagtgtcatgataccctggtacagttt
ggtgggtttttagcatcaaatctaagcacagaagattatataaaacgagtgccttcaatt
gatgtgctctgtaatgaatttcatacaccccatgatgcagcattttttctgtctaggcca
atgtatgcacaccatatttcgtccaagtatgatgaacttaaaaagtcagaaaagggaagt
aaacaacaacataaagttcataagtacattacatcctgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacgttctggtcattgacaatgtatgaccttgcagttccacataccagctatgaa
agagaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagaaaaggagcgatgtactgcccttcaggataagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttttgcagagactgaaattggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagttgtactgaaaatgaagctagtcgttatgga
agatttctttgctgcatgttagagactgtaaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtgggaataaagctgatcaattagattatgaaaattttcgacatgttgtacataaatgg
cactacaagctaaccaaggcatcggtacattgccttgaaacaggcgaatatacacacatc
aggaatatcttgattgttctaacaaaaatacttccttggtatccaaaagttttgaatttg
ggtcaggctttggaaagaagagttgataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcaattgaaaagtagaaagtcacacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgctgttgccagtgta
caaaatgggcctggtggtgggccttcttcatcatccataggaagtacatctaaatcggat
gaaagcagtactgaggaaactgataaatcaagggagagatctcagtgtggtgtgaaagct
attaataaagcttctagtgccacaccaaaagggaattcaggaaatggaaatagtggctct
aacagcagcaaaactgttaaagaaaatgataaagaaaaaggaaaagaaaaagaaaaagag
aagaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggcaaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagaccaaggaaaga
acacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaggaggag
aaattcaagaccactgtccccaatgtagaatcaaaatcaactcaagaaagggaaagagaa
aaggagccatccagagaaagagatatagcaaaggaaatgaagtcaaaggaaaatgttaaa
ggaggagagaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagataat
gcagagcctgaaaggggcaagcaaaaacgccgcaaaattgatacccacccttctccatca
cattcctccacagtaaaggacagtctcaacgaactcaaggaatcttcaacaaagctctac
attaatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagat
ttggacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaa
gagcggaaaagggatcattcaaacaatgaccgtgagctgccaccagacttgaccaagagg
cgaaaagaggaaaatggaacaattggtgtttcaaaacacaaaagtgaaagtccatgtgaa
tctccttatccaaatgagaaagacaaagaaaaaaataagtcaaaatcttcaggcaaagaa
aaaggcggtgattcatttaaatctgagaagatggataaaatctcctctggtggcaaaaag
gtaaattag
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