Muscardinus avellanarius (hazel dormouse): 308279565
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Entry
308279565 CDS
T11987
Symbol
ATG16L2
Name
(RefSeq) protein Atg16l2
KO
K20868
autophagy-related protein 16-2
Organism
mave Muscardinus avellanarius (hazel dormouse)
Pathway
mave04140
Autophagy - animal
mave04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
mave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
308279565 (ATG16L2)
04140 Autophagy - animal
308279565 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mave04131
]
308279565 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
mave03029
]
308279565 (ATG16L2)
Membrane trafficking [BR:
mave04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
308279565 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
308279565 (ATG16L2)
Mitochondrial biogenesis [BR:
mave03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
308279565 (ATG16L2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_WDR41
WD40_RFWD3
ASA1
Cytochrom_D1
FKBP15
Motif
Other DBs
NCBI-GeneID:
308279565
NCBI-ProteinID:
XP_080575817
LinkDB
All DBs
Position
1:complement(<178099337..>178112373)
Genome browser
AA seq
620 aa
AA seq
DB search
MAGPGAPCAPAARWKRHIVRQLRQRDRTQKALFLQLVPAYNHLLEKAELLAKFSEKLQLE
TKDVTPTTCQGSWEESEPDSDQSPSPGALRAKWQEEEEGLRLVCGEMAYQVVEKTAALET
LQSALEERRQSRLAALEARVAQLQEERARHLRRVQELRAQNAERRAAYEALRAHAGHREA
ALRGLQDEARHLLERLLQCKASAAAQRNQRNQRLARRERARVSQELKEAAKRTVSISESP
DILGDGLREATETLALAAEPESLESEACEKWKRPFRSASATSLTLSRCVDVVKGLLDFKK
RRGHSVGGVPEQRYQSIPVCMAARLPTWAQDVLDAHLSEVNAVRFGPNSSLLATGGADCL
IRLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGEAQSKETLS
GHKDKVTAAKFKLTKHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHIIISG
HNDQKIRFWDSRGPRCTQVIPVQGRVTSLSLSHDQLHLLSCSRDDTLKVIDLRVSNVRQV
FRADGFRCGSDWTKAVFSPDRSYALAGSWDGTLYIWDVDTGKLESSLHGPHCTAVNAVAW
CYSGSHVVSVDQGRKVVLWH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccggggccccctgtgctcccgccgcccgctggaagcgccacatcgtgcgg
cagctgcggcagcgggaccgcacgcagaaggccctgttcctgcagctggtcccggcctat
aaccacctcttagagaaggctgagctgctggccaagttctcagagaagctgcagctagag
acaaaagatgtcactcccaccacctgccagggctcctgggaggagtcagagcctgactca
gaccaaagcccatcaccaggcgctctgagagcaaagtggcaagaggaggaggaggggctc
cggctggtctgtggtgagatggcctaccaggtggtggagaagaccgcagccctggaaacc
ctgcagtcggcgctggaggagaggcggcaaagcaggctcgcggctctggaagcccgcgtg
gcgcagctgcaggaggagcgggcgcggcacctgcgccgggtgcaggagctgcgggcgcag
aacgccgagcggcgggcggcctacgaggcgctgcgcgcgcacgccgggcaccgcgaggcg
gcgctgcgcgggctgcaggacgaggcgcgccacctgctggagcggctgctgcagtgcaag
gcgagcgccgccgcccagcgcaaccagcgcaaccagcgcctggcgcgccgcgaacgggcg
cgggtgtcccaggagctgaaggaggctgccaagcgcactgtgagcatcagcgagagccca
gacatccttggtgatgggcttagggaggcgactgagactctggccctggctgctgagcca
gagtccttggagagtgaggcttgtgagaagtggaagaggcccttcaggtctgcctcggcc
acctctctgacactgtcccgctgtgtggatgtggtgaaggggctgctggatttcaagaag
aggagaggtcactcagttgggggtgtccctgagcaacggtaccagagcatccctgtgtgc
atggctgcccgacttcctacctgggcacaggatgtgctggacgcccacctctctgaggtc
aatgctgttcgttttggccccaacagcagcctcctggccactggtggggctgactgcctc
attcgcctctggaatgttgtaggaggacgcctggaggccaaccagaccctagagggagct
ggtggcagcatcaccagtgtggactttgacccatcgggctcccaggttttagcagctacc
tacaaccaggctgcccagctctggaaggtgggggaggcccagtccaaggagacactgtct
ggacacaaggacaaggtgacggctgccaagttcaagctaacaaaacatcaggcagtgact
gggagccgagaccggacagtgaaggagtgggacctcggccgcgcttactgttcccggacc
atcaatgtcctttcctactgtaatgacgtggtgtgtggggaccacatcatcatcagtggc
cacaatgaccagaagatccgcttctgggacagcaggggcccccgctgtacccaggtcatc
ccagtgcagggccgggttacctccctgagcctcagccatgaccagctgcatctgctcagc
tgctcccgggatgacacgctcaaggtcatcgacctgcgtgtcagcaacgttcgccaggtg
ttcagggctgatggcttcaggtgtggttctgactggaccaaagctgtgttcagccccgac
agaagctatgcactggcaggctcctgggacggaaccctttacatctgggatgtagacact
gggaaactggaaagcagccttcatgggccccactgcactgctgtcaatgccgtggcctgg
tgctactctgggagccacgtggtgagcgtggaccagggaaggaaggtggtgctctggcac
tag
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