Mycobacterium avium subsp. paratuberculosis E1: RC58_00340
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Entry
RC58_00340 CDS
T03787
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00020
Citrate cycle (TCA cycle)
mavi00190
Oxidative phosphorylation
mavi00650
Butanoate metabolism
mavi00720
Other carbon fixation pathways
mavi01100
Metabolic pathways
mavi01110
Biosynthesis of secondary metabolites
mavi01120
Microbial metabolism in diverse environments
mavi01200
Carbon metabolism
Module
mavi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mavi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mavi_M00149
Succinate dehydrogenase, prokaryotes
mavi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RC58_00340 (sdhA)
00650 Butanoate metabolism
RC58_00340 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RC58_00340 (sdhA)
00720 Other carbon fixation pathways
RC58_00340 (sdhA)
Enzymes [BR:
mavi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RC58_00340 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
Thi4
GIDA
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AJK73643
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All DBs
Position
93676..95619
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AA seq
647 aa
AA seq
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MVEVERHAYDVVVIGAGGAGLRAVIEARERGLRVAVVCKSLFGKAHTVMAEGGCAASMGN
TNPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRLKDGKISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDYAELGDYEARIKVFAECTITELLKD
GDAIAGAFGYWRESGQFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGASL
INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPPVFKGQYAETE
QEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLTPAEINRR
LPSMYHQFKELAGVDITKEPMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECSGGMHG
SNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPTIGESAVEAAAKRALSPFEAPAGGGP
GENPYTLQLELQQSMNDLVGIIRNADEISEALARLDKLRERFKNLHVEGQRRYNPGWNLA
IDLRNMLLVSECVAKAALQRTESRGGHTRDDHPSMDSSWRKLLLVCEAVAEPGDVEAAVI
PDITITKKEQTPMRPDLLELFDIAELEKYYTDEELAGHPGRTPRTEK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggtcgaacggcatgcctacgacgtagtcgtcatcggcgccggcggcgcggga
ttgcgcgcggtcatcgaggcgcgggaacgcggcctgcgcgtcgcggtggtgtgcaagtcg
ttgttcggcaaggcgcacaccgtgatggccgagggcggctgcgcggcctcgatgggcaac
accaacccgaaggacaactggaagacccacttcggcgacaccatgcgcgggggcaagttc
ctcaacaactggcgcatggccgagctgcacgccaaggaggccccggaccgcgtctgggag
ctggaaacctatggcgcgctcttcgatcggctcaaggacggcaagatcagccagcgcaac
ttcggtgggcacacctacccgcggctggcgcacgtcggtgaccgcaccggcctggagctg
atccgcaccatgcagcagaagatcgtctcgctgcagcaggaggattacgccgaactcggc
gactacgaggcgcgcatcaaggtgttcgccgagtgcacgatcaccgagctgctcaaggac
ggcgacgcgatcgccggcgcgttcggctattggcgcgagagcggccagttcgtgctgttc
gaggcgcccgcggtggtgctggccaccggcggcatcggcaagtcgttcaaggtcacctcg
aactcctgggagtacaccggcgacgggcacgccctggcgctgcgggcgggcgcatcgctg
atcaacatggagttcgttcagttccatccgacgggcatggtgtggccgccgagtgtgaaa
gggatcctggtcaccgagggtgtccgcggtgacggcggggtgctgaagaactccgagggc
aagcggttcatgttcgactacatccccccggtgttcaagggccagtacgccgagaccgag
caagaagccgaccagtggctcaaggacaacgactcggcccgccgcactcccgacctgctg
ccgcgcgacgaggtcgcgcgcgccatcaactccgaggtcaaggccggccgcggcagcccg
cacggcggcgtcttcctcgacatcgcgtcgcggctgacaccggcggagatcaaccgccgg
ctgccgtcgatgtaccaccagttcaaggagctggccggggtcgacatcaccaaggagccg
atggaggtcggaccgacctgccactacgtgatgggcggcgtcgaggtggacgccgacacc
ggggcggccaccgtccccggcctgttcgcggccggtgagtgctccggcggcatgcacggc
tccaaccggctgggcggcaactcgctgtcggacctgctggtgttcggccgccgggccggg
ctgggcgccgccgactacgtgcgcgcgctgagcagccgtccgacgatcggcgagagcgcc
gtcgaggcggcggcgaagcgggccctgtcccccttcgaggcgccggcgggcggcggcccc
ggcgagaacccctacaccctgcagctcgagctgcagcagtcgatgaacgacctggtcggc
atcatccgcaatgccgacgagatctccgaggctttggcccggctcgacaagctgcgggaa
cggttcaagaacctgcacgtggaggggcagcgccgctacaacccgggctggaacctggcc
atcgacctgcgcaacatgctgctggtcagcgaatgcgtcgccaaggccgcgctgcagcgc
accgagagccggggcgggcacacccgcgacgaccacccgtcgatggactcgtcgtggcgc
aagctgttgctggtctgcgaggcagtcgccgagccaggcgacgttgaagccgcggtgatc
cccgacatcaccatcacgaagaaagagcagacgccgatgcggcccgatctgctggaactg
ttcgacatcgccgagctggagaagtactacaccgacgaggagctcgccgggcatccaggg
cggacacccaggacggagaagtaa
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