Mycobacterium avium subsp. paratuberculosis E1: RC58_02530
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Entry
RC58_02530 CDS
T03787
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00500
Starch and sucrose metabolism
mavi01100
Metabolic pathways
mavi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RC58_02530
Enzymes [BR:
mavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RC58_02530
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Gene cluster
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Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AJK74023
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Position
580107..582257
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AA seq
716 aa
AA seq
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MTSAKAAAPTPTGEVWPGKAYPLGASYDGAGTNFAVFSEVAERVELCLFDGDGTESRVAL
PEVDGFVWHAYIPGIEPGQRYGYRVHGPYDPAAGQRCNPNKLLLDPYSKAVDGTFEWNQS
LFGYNFGDPDSRNDDDSAPSMPKSVVINPYFDWGNDRPPDHHYADTVVYEAHVKGLTQTH
PDIPEQMRGSYGAVAHPVIIEHLQSIGVTAIELMPVHHFANDSTLIEKGLSNYWGYNTIG
FFAPDTKYSSAATPGGQVQEFKAMVRSLHEAGIEVILDVVYNHTAEGNHLGPTLSMRGID
NAAYYRLVDDDKRYYMDYTGTGNSLNVGHPHALQLIMDSLRYWVTEMHVDGFRFDLAATL
AREFYDVDRLATFFELVQQDPTVSQVKLIAEPWDVGPGGYQVGNFPPQWTEWNGKYRDTV
RDFWRGEPATLDEFAYRLSGSADLYEHTGRRPVASINFVTAHDGFTLRDLVSYNEKHNEA
NGEDNNDGESHNRSWNCGAEGPTDDEQVNALRARQQRNFLTTLLLSQGVPMICHGDELGR
TQNGNNNGYCQDNELTWIDWANADVDLLAFTRVVSALRAEHAVFRRRRFFSGKPVGRRGQ
DGLRDIAWFTPDGTEMTDEDWGANFAKSVTVFLNGHGIPDRDARGQRLLDDSFLLCFNAH
HESIEFTLPPKEFGASWQVVVYTGPEETTPADEVPGAGVLNVDAHTAVVLRAPDGG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgcaaaggctgccgctcccacgcccaccggagaggtgtggcctggcaaggcc
tacccgctgggcgccagctacgacggcgccggcaccaacttcgccgtgttcagcgaggtg
gccgagcgggtcgagttgtgcctgttcgacggcgacggcaccgagagccgggtggcgctg
cccgaggtcgacggcttcgtctggcacgcctacatccccggcatcgaaccggggcagcgc
tacgggtatcgggtacacggcccctacgacccggcggccgggcagcggtgcaacccgaac
aagctgctgctggacccgtattcgaaggcggtcgacggcaccttcgagtggaaccagtcg
ctgttcggctacaacttcggtgacccggacagccgcaacgacgacgactcggcgcccagc
atgcccaagtccgtggtgatcaacccgtacttcgactggggcaacgaccgcccgccggac
caccactacgccgacaccgtcgtctacgaggcgcacgtcaagggcctcacccagacccac
cccgacatccccgaacagatgcgcggcagctacggcgcggtggcgcacccggtgatcatc
gagcacctgcagagcatcggggtcaccgcgatcgaactgatgccggtgcatcacttcgcc
aacgactccaccctgatcgagaagggcctgtccaactactggggctacaacaccatcggc
ttcttcgccccggacacgaaatactccagcgccgccacgccgggcgggcaggtgcaggag
ttcaaggccatggtgcgctcgctgcacgaggccggcatcgaggtcatcctcgacgtggtc
tacaaccacaccgccgagggcaatcacctgggccccaccctgtcgatgcgcggcatcgac
aacgccgcctactaccggctggtcgacgacgacaagcggtactacatggactacaccggc
accggcaacagcctcaacgtcgggcacccgcacgccctgcagctgatcatggactcgctg
cgctactgggtgaccgagatgcatgtcgacggattccgcttcgacctggccgccaccctg
gcccgcgagttctacgacgtcgaccggctggcgacgtttttcgaactggtgcaacaggat
ccgacggtcagccaggtcaagctgatcgccgaaccgtgggacgtcgggccgggcggctac
caggtgggcaacttcccgccgcagtggacggagtggaacggcaagtaccgcgacaccgtc
cgcgacttctggcgcggcgaacccgccaccctcgacgagttcgcctaccggctgtccggt
tcggccgacctgtacgaacacaccgggcgccggccggtcgcctcgatcaacttcgtcacc
gcccacgacgggttcacgctgcgtgacctggtgtcctacaacgagaagcacaacgaggcc
aacggcgaggacaacaacgacggcgagagccacaaccggtcctggaactgcggcgccgag
ggaccgaccgacgacgagcaggtcaacgccctgcgggcccgccagcagcgcaatttcctg
accacgctgttgctgtcgcagggcgtgccgatgatctgtcacggcgacgagctgggccgc
acccagaacggcaacaacaacggctactgccaggacaacgagctcacctggatcgactgg
gccaacgcggacgtggacctgctggccttcacccgggtggtgtcggcgctgcgcgccgag
cacgcggtgttccgccggcgccggttcttctccggcaagccggtgggacggcgcggccag
gacgggctgcgcgacatcgcctggttcacccccgacggcaccgagatgaccgacgaggac
tggggcgccaatttcgccaagtccgtcacggtgttcctcaacggccacggcatccccgac
cgcgacgcccgcggtcaacggctgctggacgactcgttcctgctgtgcttcaacgcccac
cacgagtccatcgaattcacccttcccccaaaggaattcggtgcatcatggcaggtcgtg
gtgtacaccgggccggaggagaccacgccagccgacgaggtgcccggtgccggcgtactc
aacgtcgacgcccacaccgcggtggtgctgcgggcacccgacggcggctga
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