Mycobacterium avium subsp. paratuberculosis E1: RC58_02630
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Entry
RC58_02630 CDS
T03787
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mavi03032
]
RC58_02630
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_02630
Enzymes [BR:
mavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RC58_02630
DNA replication proteins [BR:
mavi03032
]
Prokaryotic type
DNA Topoisomerases
RC58_02630
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RC58_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJK74040
LinkDB
All DBs
Position
complement(603204..604259)
Genome browser
AA seq
351 aa
AA seq
DB search
MRLRRSVLSKPGITRKRRGKGFSYHAPDGTTVRDPETLQRIKDLVIPPAWKKVWISPHPN
GHIQAVGVDAAGRRQYLYHCAWQQERAEEKFDRVLELSTELPAWRARIAEDLAARGLTRE
RVLALGLRLLDRGYFRSGGEQYAEENESYGLSTLLCEHVTVRRDAVEFDFPAKSGVRRTV
RVEDREVVRAVRPLMRRRHRGDRLLVCRTASGWSEVRADDLNDRFKELVGDQYTVKDLRT
WHGTVLAAAAFAEADAAVSRRVARRVEAAVMKEVAEELGNTPAVARGSYVDPRVITGYER
GLTIGAATRRAGRARDPDAAQEILDKATRMLIRRVAKGHSASGASALPKSA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcggctccgtcgcagcgtgctgagcaaaccggggatcacccgcaaacggcgcggtaag
ggattctcttatcacgcgccggacggcaccacggtgcgcgatcccgaaaccctgcagcgc
atcaaggatctggtcattccgccggcgtggaagaaagtgtggatctcgccccaccccaac
ggccacatccaggccgtcggcgtcgacgcggccggtcgccgccagtacctgtaccactgc
gcgtggcagcaggaacgcgcggaggagaagttcgaccgggtgctggagctgtccaccgag
ctgccggcctggcgggcccgaatcgccgaggacctggccgcccggggtttgacccgcgag
cgggtgctggcgctggggctgcggctgctcgatcgcggctacttccgttccggcggcgag
cagtacgccgaggagaacgagtcctacgggttgtccaccctgctgtgcgagcacgtgacg
gtccggcgtgacgcggtggagttcgacttcccggccaagagcggggtccggcgcaccgtg
cgggtcgaggatcgcgaagtggtcagggcggtgcgtccgctgatgcgacggcggcaccgc
ggcgaccggttgttggtgtgccgcaccgcatccggatggtcggaggtgcgcgccgacgac
ctcaacgaccggttcaaggagctggtcggcgaccagtacacggtcaaggacttgcgcacc
tggcacggcacggtgctggcggcggcggcgttcgccgaggccgatgccgcggtgtcgcgg
cgggtcgccaggcgggtcgaggcggcggtgatgaaagaggtggccgaggagctgggcaac
accccggcggtggcgcgcggctcctatgtggacccgcgggtgatcaccgggtatgagcgg
ggactgaccatcggcgcggcgacgcggcgcgcgggccgcgcccgcgaccccgacgccgcc
caggagatcctggacaaggccacccggatgctgatccggcgagtggccaagggccacagc
gcctccggagcatccgcgctgccgaaatcggcctag
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