Mycobacterium avium subsp. paratuberculosis E1: RC58_03500
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Entry
RC58_03500 CDS
T03787
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_03500
Enzymes [BR:
mavi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RC58_03500
DNA repair and recombination proteins [BR:
mavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RC58_03500
Prokaryotic type
RC58_03500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJK74193
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All DBs
Position
complement(774515..775843)
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AA seq
442 aa
AA seq
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MPALLWFRRDLRLHDHPALSAAADSDEVLACFVLDPRLQRSSGPRRLQFLGDSLRVLRDE
LDGRLLVTRGRPDIRIPEIAKAIGASSVHVSEDFTPFGKRRDARVRAALASVPLVATGSP
YLVAPGRVTKPDGSPYQVFTPFLRRWRDTGWRPPVKTGAASARWLDPARLGITDCEIPDP
GATLDLAAGEEAARNKWKSFVDNGLANYADDRHRPDIEGTSRMSAHLKFGTIHPRTLVAD
LDLRAAAARAYLRELAFRDFYADVLHHRPASAWRNWNSAFDAIRTDTGAEAGRRFAAWKA
GETGFPFVDAGMRQLRQTGFMHNRVRMTVASFLVKDLHLPWQWGAHWFLQQLVDGDLANN
QHGWQWCAGCGTDAAPYFRVFNPAAQGEKFDPSGDYIRRWVPELRCADDPHLRTGERPPG
YPAPIVDHATERAEALRRYRSM
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgctgttgtggttccgccgcgaccttcgcctgcacgatcatccggcgctgtcg
gccgcggcggacagtgacgaggtgctcgcctgcttcgtgctcgatccgcggctgcagagg
tcgtccgggccgcgccggctgcagttcctgggcgactcgctgcgggtgctgcgcgacgag
ctcgacggtcggctgctggtcacccgcgggcggcccgacatccgaattcccgaaatcgcc
aaggcaatcggcgcctcgtcggtgcacgtctcggaggacttcacgccgttcgggaagcgc
cgggacgcgcgggtgcgcgcggcgctggcgtcggtcccgctggtggcgaccggatcgccg
tacctcgtcgcgccgggccgcgtcaccaagccggacggctcgccctaccaggtgttcacc
ccgtttctgcggcggtggcgcgacaccggctggcgaccaccggtcaaaaccggcgccgca
tccgcgcgctggctcgacccggcgcggctcggcatcaccgactgcgaaatccccgacccc
ggcgccacgctcgacctggcggccggcgaggaggcggcgcgaaacaagtggaagtccttc
gtggacaacgggttagcgaactacgccgacgatcgccaccggcccgacatcgagggcacc
agccggatgtcggcgcacctgaagttcggcaccatccatccgcgcacgctggtcgccgat
ctcgacctacgcgccgccgcagcgcgagcgtacctgcgggagttggcctttcgcgacttc
tatgccgacgtgctgcatcaccggccggccagcgcgtggcgcaactggaacagcgccttc
gacgccatccgcaccgacaccggcgccgaggccggccgccgcttcgcggcctggaaggcc
ggcgaaaccggttttccgttcgtcgacgccggaatgcgccagctgcgccagaccggattc
atgcacaaccgggtgcgcatgaccgttgcctctttcctggtgaaggaccttcacctgccc
tggcagtggggcgcgcactggtttctgcagcagttggtggacggcgacctggcgaacaac
cagcatggctggcaatggtgtgcgggctgcgggaccgacgccgcaccctacttccgggtg
ttcaaccccgccgcccagggcgaaaaattcgatccctccggcgactacatccgccgctgg
gtgcccgaattgcggtgcgccgacgacccacacctgcgcaccggcgagcgaccgcccggt
tacccggcgccgatcgtcgaccacgcgaccgaacgcgccgaagcgctgcgccgctatcgg
agcatgtga
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