Mycobacterium avium subsp. paratuberculosis E1: RC58_03805
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Entry
RC58_03805 CDS
T03787
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mavi03032
]
RC58_03805
03036 Chromosome and associated proteins [BR:
mavi03036
]
RC58_03805
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_03805
DNA replication proteins [BR:
mavi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RC58_03805
Chromosome and associated proteins [BR:
mavi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RC58_03805
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RC58_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AJK74244
LinkDB
All DBs
Position
837956..838609
Genome browser
AA seq
217 aa
AA seq
DB search
MSEGLMNKAELIDVLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRR
AARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVVGGAAKKTA
AKKAPAKKAAAKKAPAKKAAAKKAPAKKAAVKKAPARKAATKAPVRKAATKAPAKKVAAK
KAPAKKAATKAPAKKAASKAPARKAAAKKTTARRGRK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggagggattgatgaacaaggcagagctcattgatgtgctcacacagaaattgaac
acggaccgtcggcaggcgaccgcagcggtcgagaatgtcgtcgacaccattgtgcgtgcg
gtacacaagggcgacagcgtcacgatcaccgggttcggtgtattcgaacagcggcggcgc
gccgcacgggtggcccgcaacccgcgtaccggtgagacggtgaaggtgaagccgacgtcc
gtcccggcgttccgccccggcgctcaattcaaagcggttgtctctggcgcacagcgtctc
ccgtccgagggcccggccgtcaagcgcggcgtggtcggcggcgcggccaagaagaccgcc
gccaagaaggcgcccgccaagaaggctgcggcgaagaaggctccggccaagaaggccgcc
gccaagaaggccccggcgaagaaggctgcggtcaagaaggctccggcccgcaaggccgcg
accaaggctccggtgcgcaaggccgcgaccaaggctccggccaagaaggttgcggcgaag
aaggctccggccaagaaggccgcgaccaaggctccggccaagaaggccgccagcaaggct
ccggctcgcaaggccgcggccaagaagacgaccgcgcgtcgcggccgcaagtag
DBGET
integrated database retrieval system
