Mycobacterium avium subsp. paratuberculosis E1: RC58_03890
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Entry
RC58_03890 CDS
T03787
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RC58_03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_03890
Enzymes [BR:
mavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RC58_03890
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RC58_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_wedge
AAA_30
RecG_dom3_C
SNF2-rel_dom
tRNA_anti-codon
Cas3-like_C_2
DNA_pol_lambd_f
ERCC3_RAD25_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJK74259
LinkDB
All DBs
Position
855124..857340
Genome browser
AA seq
738 aa
AA seq
DB search
MASLTDRLDFVVGAKAAEQLEELFGIRTVDDLLRHYPRSYTEGASRWGADDERPPAGEHI
TIIDTITETKTWPMKKTPKKVCHRITLGAGRNKVTATFFNANYLKKGLTEGTKVMLSGEV
GFFKNVMQLTHPAFLILDSPDGRNKGTRSLKNIANASGASGEAVLDAYERHFFPIYPAST
KMQSWDIFSCVRLVLDVLDPVPDPLPEPLRAKFDLVCEDQALRDIHLAENEARRQRARER
LTFDEAVGLQWALVARRHGELSESGPPAPPRPDGLAAELLRRLPFELTAGQREVLDVLSD
GLASTRPLNRLLQGEVGSGKTIVSVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLG
PLAMAGQLGGADNATRLALLSGSMTAAQKKQVRDEVAGGQVGIVVGTHALLQDAVEFHNL
GMVVVDEQHRFGVEQRDRLRAKARPGVTPHLLVMTATPIPRTVALTVYGDLETSTLRELP
RGRQPITSNVIFVKDKPAWLGRAWRRIGEEVAAGRQAYVVAARIDESDDDGAADQNAKAP
ETAEGLYARLRSQELAQLRLGLMHGRLSAEEKDAVMAAFRAGDIDVLVCTTVIEVGVDVP
NATVMLVMDADRFGISQLHQLRGRIGRGEHPSLCLFASWAAPDSPAGRRLTAVAETMDGF
ALADLDLKERREGDVLGRNQSGRAVTLRLLSLADHQEYIEAARDFCVQAYAGNRFDPGLS
LLAARFTDTDRIEYLDKS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgaccgaccggctggacttcgtggtgggagccaaggccgccgaacagctc
gaggagttgttcggcatccgcaccgtcgacgacctgctgcgccactacccgcgcagctac
accgagggggcgagccgttggggcgccgacgacgagcggccgccggccggcgagcacatc
accatcatcgacacgatcaccgaaaccaagacgtggccgatgaagaagaccccgaagaag
gtgtgccaccgcatcacgctcggtgcgggccgcaacaaggtgaccgccaccttcttcaac
gcgaactacctgaaaaagggcctcaccgagggcaccaaggtgatgctctccggggaggtg
ggcttcttcaagaacgtcatgcagctcacccacccggccttcctcatcctcgactccccg
gacggccgcaacaagggcacccgatccctgaagaacatcgccaacgcctcgggtgccagc
ggcgaggcggtgctggacgcctacgaacgccacttcttcccgatctatccggccagcacg
aaaatgcagagctgggacatcttctcgtgcgtgcgcttggtgctcgacgtgctcgacccg
gtgcccgacccgctacccgagccgctgcgcgcgaaattcgacctggtgtgcgaggaccag
gcgctgcgcgacatccacctcgccgagaacgaggcccgccggcagcgggcacgcgagcgc
ctgaccttcgacgaggccgtaggtttgcagtgggcgctggtggcccgccggcacggcgag
ctctccgaatccgggccgccggccccgccccgcccggacgggctggccgcggaactgttg
cggcgcttgcccttcgagttgaccgccggacagcgggaggtgctggacgtgctgtccgac
gggctcgcgtcgacccggccgctgaatcggctgctgcagggcgaggtgggctccggcaag
accatcgtctcggtgctggcgatgctgcagatggtcgacgccggctatcagtgcgcgctg
ctggcgccgacggaagttcttgctgcgcaacatcttcggtcgatccgcgacgtgctcggc
ccgttggcgatggccggccagctgggtggggccgacaacgccacaaggttggcgttgctc
agcgggtcgatgaccgcggcgcagaagaaacaggtgcgtgacgaggtggccggcggccag
gtggggatcgtcgtcggcacccacgcgttgctgcaggacgcggtggagttccacaacctg
ggcatggtggtggtcgacgaacagcaccgcttcggtgtggagcagcgagatcggttgcgc
gccaaggcccgtcccggggtgacgccgcatctgctggtgatgacggcgacgccgataccg
cgcaccgtggcgctcaccgtgtacggagacctggaaacctcgacgctgcgcgaacttccg
cgcgggcgccagcccatcaccagcaacgttatcttcgtcaaggacaagcccgcctggttg
ggtcgggcgtggcggcgcatcggcgaagaggtggccgccgggcgtcaggcctacgtggtg
gcggcgcgcatcgacgagagcgacgacgacggggcggcggaccagaacgccaaggcgccc
gaaaccgccgaggggctctacgcccggctgcgttcgcaggagctggcgcagctgcggctc
ggactgatgcacggccggctctcggccgaggagaaggacgccgtgatggccgcgttccgc
gccggcgacatcgatgtgctggtgtgtaccaccgtgatcgaggtgggcgtggacgtcccc
aacgccaccgtcatgctggtgatggacgccgaccggttcggcatcagccagctgcaccag
ctgcgcgggcggatcgggcgcggcgagcatcccagcctgtgcctgttcgccagctgggcc
gcgccggactcgccggccggccggcggctgaccgcggtggccgagacgatggacggcttc
gcgctggccgacctcgacctcaaggagcgacgggagggagatgtgttgggccgcaaccag
tccggcagggcggtcacgctgcggctgctgagtctggccgaccaccaggagtacatcgag
gccgcccgtgacttctgcgtccaggcttacgccggtaaccgcttcgaccccggattgtcg
ttgctggccgcacgattcaccgacaccgaccgcatcgaatacctggacaagtcatga
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