Mycobacterium avium subsp. paratuberculosis E1: RC58_05615
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Entry
RC58_05615 CDS
T03787
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RC58_05615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_05615
Enzymes [BR:
mavi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RC58_05615
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RC58_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AJK74563
UniProt:
A0A7L5MH33
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Position
complement(1178995..1180242)
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AA seq
415 aa
AA seq
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MTRAATSEPNSAENPFPVRAVAIRVAGWIDRLGTVWVEGQLAQVSLRPDSKTVFMVLRDP
AADMSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLA
RIERLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVKTVAAGRWPAVRFAVR
NTAVQGPNAVAQIVEALRELDRDPEVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV
ISAVGHEPDNPLCDLVADVRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSRE
QRALAQIRSRPVLAEPLRALTARAEEVHRARSAIRHDVTRLTAAETERIGHLRARLATLG
PAATLARGYAVVQTVGAGGPHVLRSVGDAPAGTRLRVRVADGAVAALSEGPTDGE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgagccgctacctccgaaccgaactccgccgaaaatccatttccggtgcgcgcg
gtggcaatccgggtcgcgggctggatcgacaggctgggcacggtgtgggtggagggtcag
ctggcccaggtgtcgctgcggccggactccaaaaccgtgttcatggtgctgcgtgacccg
gccgccgacatgtcgctgaccgtgacctgcccgcgcgacctggtgctcaacgccccggtg
aaactggccgaaggcacccaggtggtcgtgtgcggcaagccctcgttctacacgggccgg
ggcacgttttcgctgcggctgtccgagatccgcgccgtcggggtgggcgaactgctggcc
cgcatcgagcggctacgccggctgctggacgccgaagggcttttcgacccccgcctcaag
cggccaattcccttcctgcccaacatgatcgggctgatcaccggccgggcgagcgccgcc
gagcgggacgtgaaaaccgtcgcggcggggcgctggcccgcggtgcgtttcgcggtgcgc
aacaccgcggtgcagggacccaacgcggtcgcgcagatcgtggaggccctgcgcgaactc
gaccgggaccccgaggtcgacgtcatcgtgctcgcccgcggcggcggcagcgtggaggac
ctgttgccgttctccgacgagacgctgtgccgcgccatcgccgcctgccgcaccccggtg
atcagcgcggtcggtcacgaacccgacaacccgctgtgcgatctggtcgccgacgtgcgc
gcggccacccccaccgacgccgcgaagaaggtggtgcccgacaccgcggccgaacagcgg
ctgatcgacgacctgcggcggcgcagcgcacaggcgttgcgcaactgggtatctcgcgag
caacgcgcgctggcgcagatccgcagccgcccggtgctggccgagccgttgcgggcgttg
accgcacgcgccgaggaggtgcaccgtgcccggtcggcgattcggcacgacgtcacccgg
ttgaccgccgccgaaaccgagcggatcggccacctgcgcgcccggctggcgacgttgggc
ccggcggccaccctggcccgcggttacgccgtggtgcagaccgtcggcgccggcggccct
cacgtgctgcgttcggtgggcgacgcgccggcgggcacccggctgcgggtccgggtcgcc
gacggcgccgtggcggcgctgagcgagggaccgaccgatggcgaataa
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