Mycobacterium avium subsp. paratuberculosis E1: RC58_06990
Help
Entry
RC58_06990 CDS
T03787
Name
(GenBank) iron ABC transporter permease
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RC58_06990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mavi02000
]
RC58_06990
Transporters [BR:
mavi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RC58_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
ABC_membrane
AAA_21
AAA_29
ABC_ATPase
AAA_23
MT0599
nSTAND1
AAA_30
AAA_22
RsgA_GTPase
nSTAND_NTPase5
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AJK74793
LinkDB
All DBs
Position
1484575..1486311
Genome browser
AA seq
578 aa
AA seq
DB search
MIRTWLSLVPADRRNKVVAYTVLALLSVAVRAVATVLLVPLVGALFSGTPHRALVWLGWL
TAATAIGWAIDTATARIGFNLGFAVLDHSQHDVADRLPGVRLDWFTAEHTATARQAIAAT
GPELVGLVVNLLTPLISAVLLPAAIAVALVPVSWQLGLAALGGLPLMLGALWASARLARR
ADSTAAEANSALTERIIEFARTQQALRAARRVEPARSLVGDALAAQHGATMRLLAMQVPG
QLLFSLASQLALILLAGAATALTVNGTLTVAEAIALIVVIVRYLEPFTTISELAPALEST
RATLDNIRAVLTAPQMNAGSASLPGTAAPRIEFDEVVFRYDGASAPVLDGVSFSLEPGST
TAIVGPSGSGKSTILALIAGLHEPTRGRVRIDGVDAATLDAESRRAASSVVFQHPYLFHG
SIRDNVLAGDPGAGDDAYARAVALARVDELVARLPDGADSVVGEAGSALSGGERQRVSIA
RALLKPAPILLVDEATSALDTENEAAVVDALTADPRSRTQVIVAHRLASIGHADRVLFLD
DGRVVEDGTVDELRAAGGRFAEFWRQQHEAAEWRIPAG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcacctggctgagcctggtcccggcggaccgccgcaacaaggtcgtcgcctac
accgtcctggccctgctgtccgtcgcggtgcgcgcggtggccaccgttctgctggtgccg
ctggtgggcgcgctgttcagcggcaccccgcaccgggcgctggtctggctgggctggctg
accgccgccaccgcgatcggctgggcgatcgacaccgccaccgcgcgcatcggcttcaac
ctgggtttcgcggtgctcgaccacagccagcacgacgtggccgaccggctgcccggggtg
cggctggactggttcaccgccgagcacaccgcgacggcccggcaggccatcgcggccacc
ggcccggaactggtcggcctggtggtcaacctgctcacgccgctgatctcggcggtgctg
ctgcccgccgccatcgcggtggcgctagtgccggtgtcctggcaactggggctggccgcg
ctgggcgggctgccgctgatgctgggcgcgctgtgggcgtcggcgcgcctggcgcggcgc
gccgattcgactgccgccgaagccaatagcgccctcaccgagcggatcatcgagttcgcc
cgcacccagcaggcgctgcgggccgcgcggcgcgtcgagccggcgcgcagcctggtcggc
gacgcgctggccgcccagcacggcgcgacgatgcgcctgctggccatgcaggtcccgggc
cagctgctgttcagcctggccagccagctggccctgatcctgctggccggggccgccacc
gcgctgaccgtcaacggcacgctgacggtggccgaggccatcgcgctgatcgtcgtcatc
gtgcgctacctcgagccgttcaccaccatcagcgagctggcgcccgcactggagagcacc
cgcgccacgctcgacaacatccgcgccgtgctcaccgcgccgcaaatgaacgccggctcg
gcgtccctgccgggcaccgcggcgccgcgcatcgagttcgacgaggtcgtcttccgttac
gacggggcgagcgcgccggtgctcgacggggtgagcttctcgttggagccgggcagcacg
acggcgatcgtcggaccgtccggatcgggcaagagcaccattttggcgttgatcgccgga
ctgcacgagcccacccggggccgggtgcgcatcgacggcgtggacgcggcgacgctggac
gccgaatcccgccgcgcggccagcagcgtggtgttccagcacccctacctgttccacggc
tccatccgcgacaacgtgctggccggtgatcccggcgccggcgacgacgcctacgcgcgc
gcggtggcgctggcccgcgtcgacgagctcgttgcacgactgcccgacggcgccgacagc
gtggtcggggaggccggctcggcgctgtccggcggtgaacgccagcgcgtcagcatcgcc
cgcgcactgctcaaaccggcgcccatactgctggtcgacgaggcgaccagcgcgctggac
accgagaacgaggcggcggtcgtcgacgcgctcaccgccgacccgcgctcgcgtacccag
gtcatcgtggcgcaccggctggccagcatcgggcacgccgaccgggtcctgttcctggac
gacggacgggtggtcgaggacggaacggtcgacgaattgcgtgccgcgggcgggcgtttc
gccgaattctggcggcagcagcacgaggccgccgaatggcggattccggccggttag
DBGET
integrated database retrieval system
