Mycobacterium avium subsp. paratuberculosis E1: RC58_07835
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Entry
RC58_07835 CDS
T03787
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mavi03000
]
RC58_07835
Transcription factors [BR:
mavi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RC58_07835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
HTH_DeoR
HTH_11
HTH_36
MarR_2
HTH_41
HTH_IclR
NHL
HTH_23
HTH_24
TrmB
PaaX
HTH_46
MarR
Motif
Other DBs
NCBI-ProteinID:
AJK74944
LinkDB
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Position
1676714..1677526
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AA seq
270 aa
AA seq
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MGIVQQRSDKAGPVTAAAGVPLHRQLFLVLHDEIDRGVIAPGEALPTEQTLCDQFGVSRI
TVRRALADLAAQGYIERRQGVGSFVRQHDPADVPTGRSYLQGLRQTQFETEAEVVELGVR
SAPRAVAEALGRSGELLHIVRVRRQRRTREPLMVTNAWLPPELAPVLTERALRRAPLYEL
LSANGVAVDRVRHEITAEIAGPRNAQLLDVPIGAALLRVNRLVYVGDRPHHHVSALLSPS
RSRVLLSQSADDMETGDGLRIAHDVGGPRG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgggcatcgtgcagcagcgcagcgacaaggccggcccggtgacggcggccgccggtgtg
ccgttgcaccgccagctgtttctggtgttgcacgacgaaatcgaccgcggcgtcatcgcc
ccgggtgaggcgttgcccaccgagcagacgctgtgcgatcagttcggggtctctcgcatc
acggtgcgacgggcgctggcggacctggccgcgcagggctacatcgagcgccggcagggc
gtgggttcctttgtacgccagcatgatccggccgatgtgccgacagggcgctcatacctg
cagggactgcggcagacccagttcgaaaccgaggccgaagtcgtcgagctgggggtgcgg
tccgcgccccgggcggtcgccgaggccctggggcgctccggcgagttgttacacatcgtg
cgggtgcgccggcagcgccgcacccgcgagccgctgatggtgaccaacgcctggctgccg
ccggagttggccccggtgctgaccgagcgcgcgctgcggcgcgcgccgctgtatgagctg
ctgtcggcgaacggggtcgccgtggatcgggtgcggcacgagatcacggccgaaatcgcc
ggtccgcgcaacgcgcaactgctcgacgtgccgatcggtgccgccctgctgagggtcaac
cggctcgtctacgtcggcgaccgtccgcaccaccacgtctcggcgctgttgtcgccgagc
cgaagtcgggtgctgctcagccagtccgccgacgacatggagaccggcgacggcctgcgg
atcgcccacgacgtcggcggcccgcgcggctaa
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