Mycobacterium avium subsp. paratuberculosis E1: RC58_07970
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Entry
RC58_07970 CDS
T03787
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03030
DNA replication
mavi03430
Mismatch repair
mavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RC58_07970
03430 Mismatch repair
RC58_07970
03440 Homologous recombination
RC58_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mavi03032
]
RC58_07970
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_07970
Enzymes [BR:
mavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RC58_07970
DNA replication proteins [BR:
mavi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RC58_07970
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RC58_07970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AJK74966
LinkDB
All DBs
Position
1719481..1720458
Genome browser
AA seq
325 aa
AA seq
DB search
MSEVSPLHLVLGDEELLVERAVAEVLAEARKRAGASGDADVPINRMRAGDVSTYELAELL
SPSLFADERIVVLEAAGEAGKDAAAVILSAAAEMPAGVVLVVVHSGGGRAKALATELQSL
GAVVHPCARITKLSERIDFVRKEFRRLRVKADEETVTAMLDAVGSDLRELASACSQLVAD
TGGAVDAAAVRRYHSGKAEVKGFDIADKAVAGDIEGAAEALRWAMMRGEPLVVLADALAE
AIHTIGRVGPLSGDPYRLAAQLGMPPWRVQKAQKQARYWSRDSVATAMKVVATLNANVKG
AVADADYALESAVRRVAELAGGRNR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggtttcgccgttacacctggtcctcggggacgaggaactgctggtcgagcgg
gcggtggccgaggtgctggccgaggcgcgcaaacgcgccggcgcctccggcgacgccgac
gttccgatcaaccggatgcgggccggcgacgtgagcacctacgaactcgccgagctgctc
agcccgtcgctgttcgccgacgagcgcatcgtcgtgctggaggccgccggcgaagcgggg
aaagacgctgcggccgtgatcctttcggcggccgccgagatgccggccggggtggtgttg
gtggtggtgcactccggcggtggccgggccaaggcgctggccaccgagctgcagtcgctc
ggcgccgtggtgcacccgtgcgcgcggatcaccaaactgagcgaacgcatcgatttcgtc
cgcaaggagttccggcggctgcgggtcaaggccgacgaagagaccgtgaccgcgatgctg
gacgcggtcggctccgatcttcgcgagttggcctcggcctgctcgcaattggtcgccgac
accggcggggcggtcgacgccgccgcggtacgccgctatcacagcggcaaggccgaggtg
aagggcttcgacatcgccgacaaggcggtcgccggcgacatcgaaggggccgccgaggcg
ctgcgctgggcgatgatgcgcggcgagccgttggtggtgctggccgacgcgctggccgaa
gcgatccacaccatcggccgggtcggcccgctgtccggcgatccgtaccggctggcggcc
cagctggggatgccgccatggcgggtgcaaaaggcgcagaaacaggcccggtactggtcg
cgcgactcggtggcgacggcgatgaaggtggtggcgacgctcaacgcgaacgtcaaaggc
gcggtggccgacgccgactacgcgctggaatccgcggtgcgcagggtggcggagctggcc
ggcggccgcaatcgctga
DBGET
integrated database retrieval system
