Mycobacterium avium subsp. paratuberculosis E1: RC58_09565
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Entry
RC58_09565 CDS
T03787
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00900
Terpenoid backbone biosynthesis
mavi01100
Metabolic pathways
mavi01110
Biosynthesis of secondary metabolites
Module
mavi_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RC58_09565
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mavi01006
]
RC58_09565
Enzymes [BR:
mavi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RC58_09565
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RC58_09565
2.5.1.29 geranylgeranyl diphosphate synthase
RC58_09565
Prenyltransferases [BR:
mavi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RC58_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
TrbE
Motif
Other DBs
NCBI-ProteinID:
AJK75239
UniProt:
A0A7L5MIS3
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All DBs
Position
complement(2074936..2075982)
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AA seq
348 aa
AA seq
DB search
MTGAITEQLRRYLHDRRAETAYIGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATE
APDDQALLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFG
MSAAILLGDLALAWADDIVLGVDLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASAAAS
IASAMNVDTFKTACYTVSRPLQLGAAAADRPDVHDLFSQFGTDLGVAFQLRDDVLGVFGD
PAVTGKPSGDDLRSGKRTVLLAEAVELAEKSDPLAAKLLRDSIGAQLSDAEVDRLRDVIE
SVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKLATNRSA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
ttgaccggcgccatcaccgagcaattgcggcggtatctgcatgaccggcgcgccgagacc
gcctacatcggtgacgactacagcggcctgatcgccgcgctggaagagttcgtgctgaac
ggcggcaagcggctgcggcccgccttcgcctactggggctggcgcgcggtggccaccgag
gcgcccgatgaccaagcgctgctgctgttttccgcactcgagctgctgcacgcgtgcgcc
ctggtgcacgacgacgtgatcgacgactcggccacccgccggggccggcccaccacgcac
gtgcggttcgcgtcgttgcaccgagaccggcagtggcagggctcgccggagcggttcggg
atgtcggcggcgatcctgctcggcgatctcgccctggcctgggctgacgacatcgtcctc
ggtgtcgacctgacaccgcaggcggcgcgccgggtgcggcgggtgtgggccaacatccgc
accgaggtgctcggcgggcagtacctcgacatcgtcgccgaggccagcgccgccgcctcg
atcgcctcggcgatgaacgtcgacaccttcaagaccgcctgctacaccgtgtcgcgcccg
ttgcagctcggcgcggccgccgccgaccggccggacgtgcacgacctgttcagccagttc
gggaccgacctcggggtggcgtttcagctgcgcgacgacgtgctgggcgtgttcggcgac
cccgcggtgaccggcaaaccgtctggcgacgacctgcgatccggtaagcgcaccgtgctg
ttggccgaggcggtggagttggcggagaagtcggatccgttggccgccaagctgttacga
gactccatcggcgcacagctgagcgacgccgaagtggatcggctgcgcgacgtgatcgag
tcggtgggtgcgctggccgccgccgagcagcgcatcgccacgctgacccagcgggccctg
gccaccctggcggccgcacccatcaacaccgccgccaaggcggggttgtccgaattggcc
aagctggccaccaaccggtcggcctga
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