Mycobacterium avium subsp. paratuberculosis E1: RC58_12360
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Entry
RC58_12360 CDS
T03787
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RC58_12360
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mavi01007
]
RC58_12360
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mavi03016
]
RC58_12360
Enzymes [BR:
mavi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RC58_12360
Amino acid related enzymes [BR:
mavi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RC58_12360
Transfer RNA biogenesis [BR:
mavi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RC58_12360
Prokaryotic type
RC58_12360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AJK75723
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All DBs
Position
complement(2716878..2719364)
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AA seq
828 aa
AA seq
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MRVPYSWLREVVAAGAPDWDVAPAELEQTLIRIGHEVEEVIELGPVDGPLTVGRVTDIEE
LTGFKKPIRFCHVDVGDDVDREIVCGATNFVAGDLVVVALPGTTLPGGFAIAARKTYGRN
SDGMICSAAELGLGADHSGILVLPPGTAEPGADGAAVLGLDDVIFHLAITPDRGYCMSLR
GLAREIACAYDLEFVDPADVKPLPVDGQAWPLTVQPDTGVRRFALRPVTGIDPAAVSPWW
LQRRLLLSGIRATSPAVDVTNYVMLELGHPMHAHDRNRISGGLGVRFARPGETVVTLDDI
ERKLEPVDVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAVWDPAAVSRTQRRLHLP
SEAARRYERGVDPAISVAALDRCAALLAGIAGGKVSEALTDWRGEPACDGWSPPAIQMPA
DLPDRLAGVIYPPGTAAKRLAQIGAAVTADGGTLTVVPPSWRPDLLQPADLVEEVLRLEG
LEVIGSVLPSAPAGRGLSAAQRRRRAIGRSLAQSGYVEILPTPFLPAGVFDVWGLPDDDP
RRGTTQVLNPLEADRPHLATTLLPALLEALVRNVSRGLVDVSLYALAQVVQPTAETRAVQ
FIPVDRRPTDAEIAVLDASLPRQPQHVAAVLTGLREQRGPWGPGRRAEAADAFEAVRVIA
RAAGVDVRLRAAQQLPWHPGRCAEVLVGDTPVGYAGQLHPAVVERAGLPRGTCALELDLD
AIPLVATLPAPRISPFPAVFQDVSLVVAADVPAQAVADAVCEGAGDLLEDLQLFDVFTGP
QLGEHRKSLTFALRFRAPDRTLTEDDATAARDAAVRRAAEAVGAELRT
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttccgtacagctggttgcgcgaggtcgtggccgccggggcgccggactgggac
gtcgcccccgccgaactggaacagaccctgatccgcatcggccacgaggtcgaagaggtc
atcgagttggggccggtggacggcccgctgaccgtcggccgggtcaccgacatcgaagag
ctgaccggcttcaagaagccgatccggttctgccatgtcgacgtcggcgacgacgttgac
cgtgaaatcgtctgcggcgcaacgaatttcgtagcaggggacctggtggtggtggcgttg
cccggcaccacgctgccgggcgggttcgccatcgccgcgcgcaagacctacggccgcaat
tcggacggaatgatctgctcggcggccgaactcggcctgggcgccgaccattccgggatc
ctggtgctgccgccgggcaccgccgaaccgggcgccgacggcgccgcggtgctgggactc
gacgacgtgatcttccacctggcgatcacccccgaccgcggctactgcatgtcgttgcgc
ggcctggcgcgcgagatcgcctgcgcctacgacctggaattcgtcgaccccgcggatgtc
aagccgctgccggtcgacggccaggcctggccgctgacggtgcagcccgacaccggggtg
cggcggttcgcgctgcgcccggtcaccggcatcgacccggccgcggtgtcgccgtggtgg
ctgcagcgccggctgttgctgtcgggcatccgcgccacctcgccggcggtcgatgtgacc
aactacgtgatgctcgagctcggccaccccatgcacgcccacgaccgcaaccggatcagc
ggcgggctcggcgtgcgcttcgcccggcccggcgagaccgtcgtcaccctcgacgacatc
gagcgcaagctcgaacccgtcgacgtcctgatcgtcgacgacgcggcgaccgcggcgatc
ggcggcgtgatgggcgcggccagcaccgaggtgcgcgccgattccaccgacgtgctgctc
gaggccgcggtgtgggacccggccgcggtgtcgcgcacccagcgcaggttgcacctgccc
agcgaagccgcccgccgctacgagcgtggggtggatccggcgatctcggtggccgcgctg
gaccggtgcgccgcgctgctcgccggcatcgccggcggcaaggtgtcggaggcgttgacc
gattggcgcggcgagccggcgtgcgacggctggtcaccgccggccatccagatgcccgcc
gacctgcccgaccgcctcgccggggtcatctacccgccgggcaccgcggccaagcggctc
gcccagatcggcgccgcggtcaccgccgacggcggcacgttgacggtggtcccgcccagc
tggcggcccgacctgctgcagccggccgacctggtcgaggaggtgctgcggctggagggc
ctcgaggtgatcggatcggtgctgccgtcggccccggccggccgcggcctgtccgccgcg
cagcgccgccgccgcgccatcgggcggtcgctggcccagtccggttacgtcgagatcctg
cccaccccgttcctgccggcgggcgtgttcgacgtgtggggactgccggacgacgacccg
cggcgcggcaccacccaggtgctcaacccgctggaggccgaccgcccgcatctggccacc
acgctgctgcccgcgctgctggaagccttggtgcgcaacgtgtctcgcggcctggtcgac
gtctccctctacgcgctggcgcaggtggtgcagccgacagcggaaacccgtgcggtgcag
ttcattccggtcgaccgccggcccaccgacgccgagatcgcggtcctggacgcgtcgttg
ccgcggcaaccccagcacgtcgccgcggtgctgaccggcctgcgcgaacaacgcggcccg
tgggggccgggccgtcgcgccgaggccgccgacgcgttcgaggcggtgcgcgtcatcgcc
cgggccgccggcgtggacgtgcggttgcgcgccgcgcagcagctgccgtggcatccgggc
cgatgcgccgaggtgctcgtcggcgacaccccggtggggtacgccggccagctgcatccg
gcggtggtcgaacgcgccggcctgcccaggggcacctgcgcgctggaactcgacctggac
gcgatacccctcgtcgcgacgctgcccgccccccgcatctcgccgttcccggcggtgttc
caggacgtcagcctggtggtggccgccgacgtaccggcccaggcggtggccgacgccgtc
tgtgagggcgccggggacctgttggaagacctgcagttgttcgatgttttcaccgggccg
cagctcggcgagcaccgcaagtcgctgaccttcgcgctgcggttccgcgcgccggaccgg
accctgaccgaggacgacgccaccgcggcccgcgacgccgcggtgcgccgggccgccgag
gcggtcggcgccgagctgcgcacctag
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