Mycobacterium avium subsp. paratuberculosis E1: RC58_13270
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Entry
RC58_13270 CDS
T03787
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00190
Oxidative phosphorylation
mavi00860
Porphyrin metabolism
mavi01100
Metabolic pathways
mavi01110
Biosynthesis of secondary metabolites
mavi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RC58_13270
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RC58_13270
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mavi01006
]
RC58_13270
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mavi03029
]
RC58_13270
Enzymes [BR:
mavi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
RC58_13270
Prenyltransferases [BR:
mavi01006
]
Compound prenylation
Protoheme farnesyltransferase
RC58_13270
Mitochondrial biogenesis [BR:
mavi03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
RC58_13270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
AJK75878
LinkDB
All DBs
Position
complement(2939091..2940017)
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AA seq
308 aa
AA seq
DB search
MSVRGRVAPSQTPSRIPGTVLAYLALTKPRVIELLLVTAIPAMLLAQRGTVNPLLIVNTL
IGGMLAAGGANALNCVADADIDKVMKRTARRPLARAAVPTRNALVFGLVLTAGSFLWLWW
TTNLLSGLLALATIAFYVFIYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIQWPAL
VMFAIIFFWTPPHTWALAMRYKDDYKAAGVPMLPAVATERQVTKQIVVYTWLTVLATLAL
ALATGWLYAAVALVAGVWFLAMAHQLYAGVRAGEPVKPLRLFLQSNNYLAVVFCALAIDS
AIGLPHLF
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgttcgcgggcgcgtcgcgccgagccaaacgccaagccggataccaggcaccgtg
ctggcgtatctggcgctgaccaagccgcgggtcatcgaactgctgctggtgaccgcgatt
ccggcgatgctgctcgcccagcgcggcaccgtgaacccgctgttgatcgtcaacacgctg
atcggcgggatgctggccgcgggcggcgccaacgcgctgaactgcgtggccgacgcggat
atcgacaaggtgatgaagcgcaccgcacgccggccgctggcccgggcggcggtgccgacc
cgcaacgccctggtgttcgggctggtgctgacggccggctcgttcttgtggctgtggtgg
acgacgaatctgctgtcggggctgctggcgctggcgacgatcgcgttttacgtgttcatt
tacacactgctgctcaagcggcgcacctcgcagaacgtggtgtggggcggcgcggccggc
tgcatgccggtgatgatcggctggtcggcggtcaccggcacgattcagtggccggcgctg
gtgatgttcgccatcatcttcttctggacgccgccgcacacctgggcgctggcgatgcgg
tacaaggacgactacaaggcggcaggcgtcccgatgctgccggccgtggcgaccgagcgt
caggtgaccaagcagatcgtggtctacacctggctgacggtgctggccacgctggcgctg
gcgctggccacgggctggctgtacgcggcggtcgccctggtggccggggtgtggttcctg
gcgatggcccaccagctctatgccggggtgcgcgccggcgagccggtcaagccgctgcgg
ttgttcctgcagtcgaacaactacctggcggtggtgttctgcgcgctggcgatcgactcg
gcgatcgggttgccgcacctgttctga
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